| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0851 |
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| Symbol | |
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| ID | 3681752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1037717 |
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| End bp | 1039126 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716185 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_321370 |
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| Protein GI | 75907074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0828946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAATT ATCAGCGCTC AATTAACTTT TCTGCTCTAG CCATCTGGCT TGTAGTGCTA
ATCGTCGGTT TGATTGCCGG GTTTGCTGCT GGTGCTAGTC CAGTTTTACC TGGTTTAGCG
GTAGTTTCAT TAGTGGTACT GGGTTTCTTT TTTAAAAACC TAGAACAAGC CGTATTGAGC
GCTTTGATTA TTCGCAGTGC CATAGATGGT ATTGTTTCTC CGCCCTTACC CTCTGCGTTT
GCGATCGCTA TCGATATCCT CACCTTACTA TATGTAGTCG TCCTGTTGTT GCAAAAGCGT
ACTGTCCACA CCGATTGGTT TTTGTGGTTC TTCGTTGCTT GGGTAATTTT CCAAACAATG
TGGCTAGTTC TTTTACCTAT AGGTGGACTA GGACTGGATG GCGCGGTGTT TGCTACTAGT
TTGCGGGAAT GGGTTCGCTT GTTCTCCTGG CTGATGCTTT ATTTACTAGT CATGCAGCTA
AAGGAAAAGA CTCACCCCCA AACAGTAATC AATCTCCTAT TTTGGGCTTT AGTCATTCCT
CTGGCGATCG CATTTTTACA AATGTTTGTG CCTGGGATTT TGCCATCCCA GTTTGCACCT
TTGTCTGGAG GGGTTTTGTC TGAAGGTTCT CGCATTAGAG GCAGTATTGG ACATCCCAAC
AGTTTTGCTA CCTTCTTGTT ATTGTTTATT GGGCTGACTA CCTGGAAGCT AACTATTACC
AAAGTACGCT GGCCTTGGTT GCTGTTGCTG GGCTTATTGG CTTTCTTTTA TGTCAGCACC
AAAGCCTTGT TTAGCTTGAT GATGTTGGCT GTATTTATGC TGGTGTTAAT TGCTCCCAGA
TTAAGTTTAT TGAAGCTTAT CGGTGCGGCG TTTTTCTTCG GCTTAGTGAT ATTTCTATTT
GGTAGTACAG AGTTTGGACA ACAACGGCTG GGATCAATAG CACAAACACC ATTGCTCAAC
CCAGATATAG ATATATGGCG AGCAATTCTC TTGTCTTATA GCGACAATAA CAGCTTCAAC
TGGCGAATTG CCCAATGGCA CGAATTACTC GAAGCCTGGA AACAGTACCC ACTGTTCGGT
TACGGGTTGG GCGTGACTAC GCATATTGCC AGTAATGGTT TATATGCCCA TAACGATTAT
GTCCGGGCGT TAACAGAAGG TGGAATTGTC GGTTTAGTCA GCTTTATAGC CTTCTTTGGC
GTACAGATAG GGCGAATTGT CCAGTTAATG AGGCGATCGC TCTCTAATAA AACACAGAAT
AGTCTTTGCT TGGTTTTATT AGCACTTATT TTAACCATTC CTGTGGGGAT GATTACCGAA
AATGTTTGGA GTCATACCAT GTTGTTTTTT TATTGGTTTA CTTTGCTGGC GGTGGCGGGT
TGGGATTGGA ATACCAAGCC AACAACATAA
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| Protein sequence | MRNYQRSINF SALAIWLVVL IVGLIAGFAA GASPVLPGLA VVSLVVLGFF FKNLEQAVLS
ALIIRSAIDG IVSPPLPSAF AIAIDILTLL YVVVLLLQKR TVHTDWFLWF FVAWVIFQTM
WLVLLPIGGL GLDGAVFATS LREWVRLFSW LMLYLLVMQL KEKTHPQTVI NLLFWALVIP
LAIAFLQMFV PGILPSQFAP LSGGVLSEGS RIRGSIGHPN SFATFLLLFI GLTTWKLTIT
KVRWPWLLLL GLLAFFYVST KALFSLMMLA VFMLVLIAPR LSLLKLIGAA FFFGLVIFLF
GSTEFGQQRL GSIAQTPLLN PDIDIWRAIL LSYSDNNSFN WRIAQWHELL EAWKQYPLFG
YGLGVTTHIA SNGLYAHNDY VRALTEGGIV GLVSFIAFFG VQIGRIVQLM RRSLSNKTQN
SLCLVLLALI LTIPVGMITE NVWSHTMLFF YWFTLLAVAG WDWNTKPTT
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