Gene Ava_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0848 
Symbol 
ID3681749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1034363 
End bp1035355 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content35% 
IMG OID637716182 
Productglycosyl transferase family protein 
Protein accessionYP_321367 
Protein GI75907071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0711944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TGGCATTAAT TTCTGTGATC ATACCTGCTT ACAATGCAGA ATTGACTATT 
AAAAAAACAA TCGAATCTGT ACAAAACCAA ACCTTTACTG ATTGGGAAAT CATTGTTATT
AATGATGGTT CTACAGATAA AACTCCAGAA ATTATCCAAA GTATCAAAGA TGAACGGTTA
AAAATTTTTA ACTATAAAAA CGGGGGATTA CCAGTAGCGC GTAATCGTGG TATTCTTCAT
GCAACTGGAG AATTCATTGC TTTTCTTGAT GCAGATGATT TATGGACTGT TGATAAACTG
GAAAGGCAAT TAAAAGCTTT GCAACAGCAT CCAAAAGCTG GAGTTGCCTA CAGTTGGACT
TGTTTTATGG ATGTAGATGA ACAAGGAGAA CCTTTAGCAT ATTTGCCATC ATCTCCATAT
TCTTTTACCG GAAATGTGTA TCAAAATCTG TTAGTGAGTG ATTTTATTCA CAGTGGTTCA
AATACGTTGA TACGTAAGGA AGCAATTAAT TCAGTAGGCG AATTTGATCC GATGCTCAAA
TCTTGTGAAG ATTGGGATTA TTGGCTGCGC CTAGCAACTA ATTGGGATTT TGTTGTAGTC
CCTGAATACC AAATATTTTA TCGTCGGACT CCTGGGGCAA TGTCATCTAA AGTTGAGGTG
ATGAAAGAAG CCTGTCTCAT AGCAATGGAA AAGGCTTATC AAGCAGCACC ACCACAACTA
CAATATTTGA AAAAATATAC TATGAGTAGC TTTCATCTCT ATTGCTCAAG TTTGTATATT
CAACATCGTG ATGACAAGTT TGCAATTAGC CAAGCGCAAC AACATTTGTT GGCAGCAATT
GGGTTAAATC AAAAGATTTT ACTAGAGAAA ACAACTCAAA AGTTATTAAT CAAGTTTCTC
TTGAAAAAGA TTTTTCCCCC ACAGGTGACT AATTATGTTT TGCAGTTAAC GAAAAAACGT
ATTTCTCTGA ATGTTCCGAG GTTAGAAGCA TGA
 
Protein sequence
MKNMALISVI IPAYNAELTI KKTIESVQNQ TFTDWEIIVI NDGSTDKTPE IIQSIKDERL 
KIFNYKNGGL PVARNRGILH ATGEFIAFLD ADDLWTVDKL ERQLKALQQH PKAGVAYSWT
CFMDVDEQGE PLAYLPSSPY SFTGNVYQNL LVSDFIHSGS NTLIRKEAIN SVGEFDPMLK
SCEDWDYWLR LATNWDFVVV PEYQIFYRRT PGAMSSKVEV MKEACLIAME KAYQAAPPQL
QYLKKYTMSS FHLYCSSLYI QHRDDKFAIS QAQQHLLAAI GLNQKILLEK TTQKLLIKFL
LKKIFPPQVT NYVLQLTKKR ISLNVPRLEA