Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0843 |
Symbol | |
ID | 3681861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1028569 |
End bp | 1029519 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637716177 |
Product | glycosyl transferase family protein |
Protein accession | YP_321362 |
Protein GI | 75907066 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.273314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00465248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTACTA TATCTGTAAT TATTCCTGCC TATAATGCTG AACGCACAAT TTTAGCGACA ATATCTTCTG TTCAGCAACA GACATTCTCA GATTTTGAGT TGATTATTAT TAATGATGGT TCTACTGACA GGACTCTAGA GTTAATTCAG AATATTCAAG ATGAGCGATT GAAGATATTT TCTTATGAAA ATGGTGGTTT ACCAGTAGCA CGTAATAGAG GAATTTCTCT TGCAAGTGGG GAATTTATTG CTTTCCTTGA TGCCGATGAT TTGTGGACAC CAGATAAATT AGAATTGCAA TTAGCAGCAT TACAACAAAA TCCAGAGGCG GGAGTTGCTT ATAGTTGGAC TTATTTTATG GATGAGCAGG GAAAATCTTC AATCCCTGGT GTTTCCCTAT TCTTTGAGGG TGATGTCCAA GCTAATTTGT TAGTTAATAA TTTTCTTGCT AGTGGTTCAA ATCCCCTAGT TCGTAAGCAA GCCATTGAAT CTGTAGGAGA TTTTGATTCT AACTATAAGG CTTGTGAAGA TTGGGATTAT TGGTTACGTT TATCAGCCGA TTGGAATTTT GTTGTAGTTC GCAAACATCA AATTTTTTAT CGCCAATCTG CCACTTCCAT GTCATCTACT AAAGTTAAAA ATATGGAAGA TAATGGATTA TTAGTGATTG AAAAAACTTT TCAGTCTGTA AAACCGGAAC TGCAATATTT AAAAAATCAG AGTTTGGCCT GGATTTATCA ATATTCTACA CAACAATACC TTAAGCAGAA TATTAACAAT ATTGAGGCAG TCCGTCATGC TAGAGAAAAA TTATGGCAGG CAATTCGCTT GCACCCGCCA ATTTTATTAG CAAATTATGC TCAGGATTTA ATTATCTGGC TGATAAAAAA ATGGATATTA ACTAAAATAT ATATCCTAAG AAATAAAAAT AAACCACTAA TGATTAAATA A
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Protein sequence | MPTISVIIPA YNAERTILAT ISSVQQQTFS DFELIIINDG STDRTLELIQ NIQDERLKIF SYENGGLPVA RNRGISLASG EFIAFLDADD LWTPDKLELQ LAALQQNPEA GVAYSWTYFM DEQGKSSIPG VSLFFEGDVQ ANLLVNNFLA SGSNPLVRKQ AIESVGDFDS NYKACEDWDY WLRLSADWNF VVVRKHQIFY RQSATSMSST KVKNMEDNGL LVIEKTFQSV KPELQYLKNQ SLAWIYQYST QQYLKQNINN IEAVRHAREK LWQAIRLHPP ILLANYAQDL IIWLIKKWIL TKIYILRNKN KPLMIK
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