Gene Ava_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0841 
Symbol 
ID3681859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1026178 
End bp1027134 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content37% 
IMG OID637716175 
Productglycosyl transferase family protein 
Protein accessionYP_321360 
Protein GI75907064 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.817689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00989101 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAAAG TTTCTGTAGT GATTCCAGCT TATAATTCTA TGGACTATTT ACCAACAACG 
CTGGAAACTG TTTTTGCTCA AACATTTACC GACTTTGAAG TATTGATAAT TAATGATGGT
AGCTCTGACA ATATTGTTGA ATGGGTTTCT AGTCTCACTG ATGGCAGAAT CCGCCTTATC
ACCCAAGAAA ACCAAGGTTT AACAGGCGCA CACAACACAG GTGTGATGCA AGCGCAAGGT
GAATACATAG CATTTTTGGA TGCAGATGAT CTCTGGGAAC CAAGCAAACT AGAAAAACAA
GTATCTTGCT TAGATGAAAA TCAAGAAATT GGCTTAGTAG ATACTTGGGT AATGCTAGTT
GATGAAACAG GAGAATCTAC AGGAACCATA CTGAAAACTA ATGCTGAAGG TAATATCTGG
AAACAAATTA TTCAATGTCC TACTGTTGTC TGTGGTAGTT CACCTTTAGT CAGGAAGCTT
TGTTTTCAAG AAATAGGTTT ATTTGACCCC GAAATGGGTG GCTCATCCGA TTGGGATATG
TGGATTCGCA TTGCATCTAG ATATAACTTT GCCCTAATTA AAGAACCATT AACCCTTTAT
AGACAACATC GTAGTAGTAT GTCAAAAAAC TGCGATCGCG TATTTCGAGA AAACCAATCT
GTCATCGAAA AAACCTTTAA ATCTGTACCA CCAGAATTGC AAAATTTAAA ACAACGTGCC
TATGCTTTAG TTTATTTATA TCTCGCCTGG AGAGCTTTAG ATAATAGAAA TTACGAACAA
GCTATTTATT ATCGTCAACA AGCTTATAAT AGCGACCCTC AAGTTATTTA TTCTAAATCT
GGTCTGTCTC AAAAATTTGC CATACTGGTA ACTCGTTTCT TTGGTGCTTC TGGCTTGGAT
GGAGTCAGAA ATATCAGTCG AGCTTTGCGA AGAAACATCT TAGCACTCAT ACCTTAA
 
Protein sequence
MPKVSVVIPA YNSMDYLPTT LETVFAQTFT DFEVLIINDG SSDNIVEWVS SLTDGRIRLI 
TQENQGLTGA HNTGVMQAQG EYIAFLDADD LWEPSKLEKQ VSCLDENQEI GLVDTWVMLV
DETGESTGTI LKTNAEGNIW KQIIQCPTVV CGSSPLVRKL CFQEIGLFDP EMGGSSDWDM
WIRIASRYNF ALIKEPLTLY RQHRSSMSKN CDRVFRENQS VIEKTFKSVP PELQNLKQRA
YALVYLYLAW RALDNRNYEQ AIYYRQQAYN SDPQVIYSKS GLSQKFAILV TRFFGASGLD
GVRNISRALR RNILALIP