Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0840 |
Symbol | |
ID | 3681858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1025182 |
End bp | 1026138 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637716174 |
Product | glycosyl transferase family protein |
Protein accession | YP_321359 |
Protein GI | 75907063 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0249486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAG TATCAGTTGT TATTCCTGCT TATAATGCGA TGAAATACCT CCCCGCCACA GTGGAGAGTG TCTTACAACA AACATTTACT GATATAGAAA TTTTAATTAT TAATGATGGG AGTTCAGATA ATATTATTGC CTGGACTACA CAAATCACAG ACCCACGAGT GCAAGTGATT TCCCAACAAA ATCAAGGCTT ATCGGGAGCG CGTAACACAG GTATTAATCA CGCATCTGGA GAATATATAG CCTTTATCGA TGCTGATGAT TTATGGCTAC CAAGTAAATT AGAAAAGCAA GTGAAATGTT TAGATAATTC TCCACAAGCT GGTTTAGTTT ATACATGGAC AGCTTGGACT GATGAAACTG GTAAACCTAC AGGTGTGATA GTCGCTTCCG ATGTCGAAGG GTACGTCTGG GAACAAATGG TTGTCAATGA CAAAATATCT AACGGTAGTT CGGCGATGGT GCGTCGTATT TGTTTTGACA AAGTAGGCTT ATTTGACACA GAATTGACCA GTTCGGAAGA CCGCGATATG TGGATTAGAC TGGCGGCTCA TTATCACTTT GCGGTTGTCA AGGAACCCCT CACACTCTAC CGCCGACATT CACAAAGTAT GAGCAAAAAT CGTCCGAAGA TGCTCAAAAA TATCCGCCGA GTTTTTGAAA AAACCTTTGA GACTGTCCCA ACAGAACTAC TATACTTGCG AAACCGGAGC TACGGGTGGA TAAATTTGTA TACAGCTTGG ACTTGTATGG ATGAAAAGAA TCACCAGGAA GCAATCAAAT ATCGTCGCCA AGCTCTTTTA CATTACCCAC AGATTTTTTT CACAGCCTAT TTCTTACGTT TGAGTGTAGC TATTGTGATT ATGCAGTTAT TAGGCTCTCA AGGCTATGAT AACCTGCGAT CGCTCATTCG TAACTTGCGT AGATTGGTTT TAGGCGCTGC AACCTAA
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Protein sequence | MPKVSVVIPA YNAMKYLPAT VESVLQQTFT DIEILIINDG SSDNIIAWTT QITDPRVQVI SQQNQGLSGA RNTGINHASG EYIAFIDADD LWLPSKLEKQ VKCLDNSPQA GLVYTWTAWT DETGKPTGVI VASDVEGYVW EQMVVNDKIS NGSSAMVRRI CFDKVGLFDT ELTSSEDRDM WIRLAAHYHF AVVKEPLTLY RRHSQSMSKN RPKMLKNIRR VFEKTFETVP TELLYLRNRS YGWINLYTAW TCMDEKNHQE AIKYRRQALL HYPQIFFTAY FLRLSVAIVI MQLLGSQGYD NLRSLIRNLR RLVLGAAT
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