Gene Ava_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0834 
Symbol 
ID3681852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1019412 
End bp1020011 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content42% 
IMG OID637716168 
Productphotosystem II oxygen evolving complex protein PsbP 
Protein accessionYP_321353 
Protein GI75907057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.369195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0462432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATC ATGCCTACCT TCATATTGCT TCCGGCCTAA AGGAATCTGT AAAGATGTGG 
AAAAGAATTG TATTGACGTT GCTATTGGTC TTGAGTTTTA GCTTGAGTAA TCCTGATGTA
GCCAAGGCTG CTGGATTCAA AAGCTTTGTA GACACTGCTG ATGGCTATGA GTTTTTATAC
CCTAATGGCT GGTTGCAGGT AAAAGTTGCT AACGGCCCTG ATGTGGTGTT TCACGATTTA
ATTGAAATTT CCGAGAATAT CTCTGTTGTC ATTAGTCCCG TTCCCGATGA CAAAAGTTTG
AAAGAACTGG GTACACCAAC GGAAGTAGGT TACAAATTGG GAAAAGCCGC TTTAGCACCT
CCTGATTCTG GTCGCTCGGC TGAACTGGTC AACGCTTCTG AGTACGAATC AGAAGGTAAA
ACATACTACC ACCTTGAGTA TTTAGTAAAG CTTCCCAATC AGCAAGAACG ACATAACATC
GCCAGTGTGG CTGTTAGTCG TGGTAAACTT TTTACCTTTA ACGCTTCGAT TCCTGAAAAA
CGTTGGCGAA AAGTTAAAGG GACTATGGAA GATGTGGCGA ACTCTTTTGT AGTGTATTAA
 
Protein sequence
MRNHAYLHIA SGLKESVKMW KRIVLTLLLV LSFSLSNPDV AKAAGFKSFV DTADGYEFLY 
PNGWLQVKVA NGPDVVFHDL IEISENISVV ISPVPDDKSL KELGTPTEVG YKLGKAALAP
PDSGRSAELV NASEYESEGK TYYHLEYLVK LPNQQERHNI ASVAVSRGKL FTFNASIPEK
RWRKVKGTME DVANSFVVY