| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0828 |
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| Symbol | |
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| ID | 3681846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1014355 |
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| End bp | 1016559 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716162 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_321347 |
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| Protein GI | 75907051 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.84548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.140102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AATCTCCCAG AGCCAAAGCT TGTAGCTGTC ACAATATTAC CTGCTGTCCC
GCAAAAGAAG CAGGCAAACT ATTTCTCTGG TTTCCCATTC CCCATACCCT GAAAAAAGTC
ACTGATTATT TACAAAAGTT GGCGATTAAG TTTGAATTGA TGGGTGAAAG ACCAGGTTTA
GGTCTAGGTT GTAGAGCTGG ACAAGCCCAA GAGATTGCTC ATAGTGTGGC TCAAATCCTG
ACATCAAGAG AATTGAAAGA GACACAAGTT CTATTCATTC GCGGTGCTAT CCAACCGCAA
CTCCAAGATT TTAGTGACAT CTCATCATTA CAACGCTTTG TCAAGTTTAG TCAATCCGAT
TGGTTAGTAG AAATGCTGGC TCAGGAAAGA TTCACCAGTC ACTTTCAACC AATTGTCTCA
ATGAAGAATA CATCAGAGAT TTATGGATAT GAAGCATTAT TGCGCGGACT AGATGAACAA
GGGAATTTAA TACCGCCACA GCCCATTGTG GAGTTAGCAA CCGAAGCTGG ACTTCTTCCT
CAACTCGACC GAATTGCTCG CCTGAGTACA ATTGCTCAAT TCAGCAGTCA TCAAGTGAGT
GGGCAAATTT TCATTAATTT TGCACCAACG GCGGTTTATG ATCCAGCATC TTGTCTTAAA
AGTACAGTAG AAGCCATTGA TCAAGCAGGT ATTTCTCATG AGCGGGTGGT ATTTGAAGTT
GTAGAGTCAG ATAGTCCTCA GGATTTAGAT CATCTCAAAG CTGTTCTCAA GTACTACCGG
GATGCAGGTT TTTCTATAGC CCTTGATGAC CTTGGTTCTG GTTATTCCAG TCTCAACTTA
CTACATCAAT TACGTCCAGA TTTTATTAAA TTGGACATGG AATTAATTCG AGATGTGCAT
CAAGACTTAT ACAAAGCTTC AATTACCGAG AAGCTGTTAG AAATAGCTCA AAAGTTAAAT
ATTCGTACCG TTGCTGAGGG GATTGAGTGC ATTGAGGAAC TAAATTGGGT ACAAGAACGA
GGTGCAACTT TTGCTCAGGG CTATTTAATT GCTAAACCTG ATATAGTACC TGTGACAACA
ACACCGCATT TTGATACAAA TACATCAACT CTAGTTTTGC ATTGTTCTAA GCAGGTTGAG
CAGTTTGTCC AACACCAAAG TGAGTCTGAG AGAATTGTTG CTGCTGTTAC ACAACGTATT
CGACAATCGT TAAAGTTAGA GGAAATTTTG CAGACTACCG CAGATGAAGT GCGTCAGCTG
TTTGAGGTAG ACCGAGTATT AATCTATCGA TTTGAGCCAG ACTGGAGTGG ATTAGTTGCT
GTAGAGTCTT TAACGGAAGG ATCTATGTCT ATTCTGGGGT TTCATATCCT AGATACGTGC
TTTCAATCTA CCCATGCGGC TTACTACCAA CAAGGCAATA CTAGGGCGAT GGAAGACATT
GAAAATGCTG GACTGTCGCC ATGTCATCTT CAGCTTTTGC AGAGTTTGCA AATTAGGGCA
AATTTGATTG TGCCTATCTT ACAAAAAGAA CGTTTATGGG GACTATTAAT CGCTCATCAA
TGCACTAGCA CCCGACAATG GCAGCAATCT GAGATTAACT TATTTAACCA GCTGGCGAGT
CAGGCCGCGA TCGCTATTCA GCAATCGGAA CTTTATCTAC AATTACAGCA AGCAAATCTG
GAATTACAGC GCCTTGCTTG TTCAGATGGT CTGACCCAAG TAGCAAATCG ACGCTGCTTT
GATAATACGA TCGCCTTAGT GTGGGAGCAT TTAGCACGAG AGCAGGGTTC GTTATCTTTA
ATTTTGTGTG ATGTCGATTG CTTTAAGCTT TATAACGATA CATTAGGACA TCTGGCTGGA
GATGATGTAC TCAGGCACGT AGCTGGGGCA ATTTCTCGGA GTGTGAAAGG CCCTAGCGAT
TTAGTTGCTC GGTATGGTGG CGAAGAGTTT GCTGTTATTT TACCCAATAC TGATGCGGAA
GGGGCGATCG CTGTTGCTAA AGAAATTCAG TCTAATGTGA GTATATTACA ACTGCCTCAT
CCTAGTTCTC AAGTTAGTGA ACTCATTTCC TTAAGTCTTG GTTTAGCTAC TACTATTCCC
GATAGCCAGT CGTCTCCGGC AATTCTAATT GCTGCTGCTG ATCAAGGACT ATATCAAGCA
AAAGCCCAAG GCAGAAATTG TCTAGTTCAG GTGGAGAGGA TATGA
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| Protein sequence | MSKKSPRAKA CSCHNITCCP AKEAGKLFLW FPIPHTLKKV TDYLQKLAIK FELMGERPGL
GLGCRAGQAQ EIAHSVAQIL TSRELKETQV LFIRGAIQPQ LQDFSDISSL QRFVKFSQSD
WLVEMLAQER FTSHFQPIVS MKNTSEIYGY EALLRGLDEQ GNLIPPQPIV ELATEAGLLP
QLDRIARLST IAQFSSHQVS GQIFINFAPT AVYDPASCLK STVEAIDQAG ISHERVVFEV
VESDSPQDLD HLKAVLKYYR DAGFSIALDD LGSGYSSLNL LHQLRPDFIK LDMELIRDVH
QDLYKASITE KLLEIAQKLN IRTVAEGIEC IEELNWVQER GATFAQGYLI AKPDIVPVTT
TPHFDTNTST LVLHCSKQVE QFVQHQSESE RIVAAVTQRI RQSLKLEEIL QTTADEVRQL
FEVDRVLIYR FEPDWSGLVA VESLTEGSMS ILGFHILDTC FQSTHAAYYQ QGNTRAMEDI
ENAGLSPCHL QLLQSLQIRA NLIVPILQKE RLWGLLIAHQ CTSTRQWQQS EINLFNQLAS
QAAIAIQQSE LYLQLQQANL ELQRLACSDG LTQVANRRCF DNTIALVWEH LAREQGSLSL
ILCDVDCFKL YNDTLGHLAG DDVLRHVAGA ISRSVKGPSD LVARYGGEEF AVILPNTDAE
GAIAVAKEIQ SNVSILQLPH PSSQVSELIS LSLGLATTIP DSQSSPAILI AAADQGLYQA
KAQGRNCLVQ VERI
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