Gene Ava_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0821 
Symbol 
ID3682341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1000495 
End bp1002453 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content44% 
IMG OID637716150 
ProductFHA domain-containing protein 
Protein accessionYP_321340 
Protein GI75907044 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000484156 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC CACAAATTCA ATTGAGTTGG GAAGACCCAA TAACTGGAGA ACGGCGAGAA 
CCAAAGTTAG ATGTGCCTAT TGCTTTTGGT CGAGAATTCG CGCGTTTACC TGCCGAACTG
GACGGAAAGC GCGTTTCCAG AATGTTGCTC AACAGTGATC AAATTTCTCG TTACCATGCT
CTCATTATCT GGGAAAATAA CCAATTAATA GTAATTGACC AAGGTAGTGT CAATGGTACA
TTCATCAACG GTCAGCAACA AAAACGTAGT GTTCTGACTA GCGGTGATAC ATTGCAAATT
GGCCCCTACA TCATGATGGT GACACTCACA GTTCGTGTCA CTGCGCCAAT CACCAATCCT
CCTTCATTAA TTCAATTTAA TCCCAATACC AATCTTCCTG ATCCAAACTT ACCAGCAACC
CCCCCCATAA CACCTTTAGG AAACAATTTT CCACCACCAG TATTTCAAGC AGAACAGGTT
CCTGTACAAG CACTCCACGC TACAGGTCTG CCCGTAGATG AATGCGATTA TCTAGCTGTT
GGTGGAGGAT TAGGCAGCTT TATTTGGACT GATTTATTGC GAATTAGTGG TGTCCGTGCG
GAGAAAATTG TAGCCCTGGG GTTAGAAGCA GAACCTTACG CGCGTTATAA GCGCCTTTGC
CTTAATTCCC AAATACCCTT ACACGAAAGA TTGCGGTCAA ATTCTGATTC TTGCCCTGAT
AATATTTGGG GTTGGCCTAG TTATGCTTGG CGAGAAACTT GGCAGGACTT AACCAAAGGT
AATTTAAACA CAGCGTTCCG GTATTTGTGG CAGGTATTTG CTGAACCAAC CTTTGCCGAA
ACTTACACTC CCCGTGCCAG CAACGTTTTC GACTCCATAG ACAGGGAAGC CAAACGTATT
AACTGGAATC AAATTTATCG CTATGGGCGA GTTAGATCAA TTCGCAAAAC CGATGACGGG
AGATATTGTA TAGCCTATTC TCGTGGGCAA GGCAATCATG CTTTTTTAGT GAGCCGTTAT
TTACATTTAG CTACAGGGTA TCCAGCAATT CAGTTTCTCC CTGATTTGCA AGCTTATAGA
GAGAAGTACC GAGATTTTAA ATCTGTCGTC AATGCTTATG AAGCACACGA CCATGTATAT
GAGCAATTAG AACACCAAGG TGGTACAGTC CTGATTCGGG GTCGCGGAAT TGTCGCTTCA
CGCATCGTCC AACGCATTTA TGAAGCAAGG CGCAAAAATC CTAATATTAC AGTTTTGCAC
TTGATGCGAT CGCCTAAACC CCAAGGCAAC ACATTTCAAA AAGCCACACG TCTAGTCAAA
AACCATTACG AATTTCAACC ATTCAACTGG CCAAAAGCCT GCTGGAGCGG TGAACTCCGC
GTTATGTTAG AACAAGCCAC TCCAGAAGAG CGCAAACGCT TACTAACAGA CTGGGGCGGT
ACAACCACCG CCGACAGACA AGACTGGCAA CGCATTACAG AACAAGGGTT AAGAGAAGGT
TGGTATCAAA TTACTTTCGG CGAAGTGTTG GGAGTAGAAA GAGATGCACA AAACCGTACT
ATCACCAAAA TCCAAGAAAA AGGTTTTGGG GAAATGAAAC TGACGGCTGA TTTTATTGTT
GACGCTACTG GTTTAGATGC CAAAGTGCAA GCTAATCCTT TGTTAGAAGA CCTAGTAAAA
CAATACAACC TACCTTTAAA CTATCTAGGA CGCTTAACGG TCACAAATGA TTTTGAGATC
GCAGAAATGC GTCATGGTAA GGGACAAATG TATGCAGCCG GGGCAATCAC TCTTGGCGGA
CCTTACGCAG CCGTTGATAG TTTTTTGGGC TTACAATATG CGGCTCTCGT TGCCCTTGAC
GGACTTGCCG CAGTCCGCGC GCCTGGTGTC CGCCGTTTAA ATGCAGTCAG TTCTTTTAGC
CAATGGTTAA AGTGGGTATT TAATCAGTCA CCATCATAA
 
Protein sequence
MTNPQIQLSW EDPITGERRE PKLDVPIAFG REFARLPAEL DGKRVSRMLL NSDQISRYHA 
LIIWENNQLI VIDQGSVNGT FINGQQQKRS VLTSGDTLQI GPYIMMVTLT VRVTAPITNP
PSLIQFNPNT NLPDPNLPAT PPITPLGNNF PPPVFQAEQV PVQALHATGL PVDECDYLAV
GGGLGSFIWT DLLRISGVRA EKIVALGLEA EPYARYKRLC LNSQIPLHER LRSNSDSCPD
NIWGWPSYAW RETWQDLTKG NLNTAFRYLW QVFAEPTFAE TYTPRASNVF DSIDREAKRI
NWNQIYRYGR VRSIRKTDDG RYCIAYSRGQ GNHAFLVSRY LHLATGYPAI QFLPDLQAYR
EKYRDFKSVV NAYEAHDHVY EQLEHQGGTV LIRGRGIVAS RIVQRIYEAR RKNPNITVLH
LMRSPKPQGN TFQKATRLVK NHYEFQPFNW PKACWSGELR VMLEQATPEE RKRLLTDWGG
TTTADRQDWQ RITEQGLREG WYQITFGEVL GVERDAQNRT ITKIQEKGFG EMKLTADFIV
DATGLDAKVQ ANPLLEDLVK QYNLPLNYLG RLTVTNDFEI AEMRHGKGQM YAAGAITLGG
PYAAVDSFLG LQYAALVALD GLAAVRAPGV RRLNAVSSFS QWLKWVFNQS PS