Gene Ava_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0795 
Symbol 
ID3680734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp975784 
End bp976926 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content42% 
IMG OID637716124 
Productmagnesium/cobalt transporter CorA 
Protein accessionYP_321314 
Protein GI75907018 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.149468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAA AACTGCGTCG CTTTGCCAAA GTAGTCAATA AACCATACAA AGATGAGTTC 
TATCACTACC CTGGAACCAT CCCTGGAACC ATTATTATTG ATGCAGATGC GCCACCACCG
GAAATTGACT TGATTGACTA TAATCAAACT GATTTTGTTC ATCGGCGAGT TGCAACCCCG
GAAGAATGCG TTCCCTATTT GGATACGGAG TCTGTGACTT GGGTAGATGT CCAGGGTTTG
GGTAATCAAG ACATCTTAGA GCGAGTGGGG CAAATTTTTG AATTACCGCC TCTGGTGTTG
GAAGATGTGG TGAATGTATC GGAACGCCCC AAAACTGAGG ATTATGACGA CCAATTATTA
TTTATTGCCC GGATGGTTGT ACCCAAGGAA AGAGAATCAG GGTTTTATAG TGAGCAAGTC
AGTTTAGTCT TAGGTAAACA TTACTTGTTA AGTATTCAGG AAGAACCGGA GCATGATTGC
TTTGAAGGCG TGAGGATGCG AATTGAAAAA GGTAAAGGAA ATATCCGTCG CCAAAGGGCA
GACTATTTAG CTTATGCTTT GCTTGATGCA ATCATTGATG GTTTTTTCCC CGTTTTGGAA
CGTTACGGGG AAGCACTTGA GGATTTAGAA GAAGAAGTAA TCGTTAGTCC TACTCGCCAA
ACACTGCAAA AAATTTATCA AGTCAGGCGA GAATTACTAC AACTGCGTCG CGCTATTTGG
CCGCAACGAG ATGCGATTAA TTCTTTGATA CGCGATCGCA GTCAACTAAT TAGCCCGGAG
GTGCAAATCT ATCTCCGCGA TTGTTATGAC CATACAGTGC AAGTCATGGA TATGGTGGAA
ACCTACCGCG AGTTAGCCTC TGGTTTGATG GATGTATACT TGTCAGCAGT CGGTAACAAA
ATGAATGAAG TTATGAAACT ACTGACAGTG GTTTCATCTA TCTTTATTCC CCTAACTTTT
GTTGCAGGTA TATATGGCAT GAATTTCAAT ACGGAAAAAT CACCCTACAA TATGCCTGAG
TTGAACTGGT ATTGGGGTTA TCCCCTGTGC TTAGGAGTTA TGGGAGCGAT CGCTTTTGCA
TTACTCTTTC TATTTTGGAA ACGAGGTTGG CTAGAAAATT CTTCTATGAT TGAGCGTGAT
TAA
 
Protein sequence
MIRKLRRFAK VVNKPYKDEF YHYPGTIPGT IIIDADAPPP EIDLIDYNQT DFVHRRVATP 
EECVPYLDTE SVTWVDVQGL GNQDILERVG QIFELPPLVL EDVVNVSERP KTEDYDDQLL
FIARMVVPKE RESGFYSEQV SLVLGKHYLL SIQEEPEHDC FEGVRMRIEK GKGNIRRQRA
DYLAYALLDA IIDGFFPVLE RYGEALEDLE EEVIVSPTRQ TLQKIYQVRR ELLQLRRAIW
PQRDAINSLI RDRSQLISPE VQIYLRDCYD HTVQVMDMVE TYRELASGLM DVYLSAVGNK
MNEVMKLLTV VSSIFIPLTF VAGIYGMNFN TEKSPYNMPE LNWYWGYPLC LGVMGAIAFA
LLFLFWKRGW LENSSMIERD