| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0792 |
|---|
| Symbol | |
|---|
| ID | 3680517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 970501 |
|---|
| End bp | 971931 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637716121 |
|---|
| Product | periplasmic sensor Signal transduction histidine kinase |
|---|
| Protein accession | YP_321311 |
|---|
| Protein GI | 75907015 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0106036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCT GGTGGCCTGC TATTAAATTA AATACTATTC ATTCCAAGTT GTTAGCTACT
TATCTGCTGC TGATAGTCTT GGGGACTTCC TGTATGGCCA GCTATATTCT CTGGTCTTTC
CATGTTTACT TTATGCGATC GCGACAAAGC GACTTAGAGA ACTGGACAAA TGCTTTGAGC
GAGAGTGTAG CAGATGCTTT GGAAGAAAAA AATCTGCAAC GCGTCAATCT ATTAGTGCAG
AGATATGGCG CACCACAAAA CCTTACACTC CGTATTTTTA ATCAGAAAGG TAGCTTGCTA
GCCACTTCTG ATCCCAATTT AGATCAACAA GTTCAAAACT GGTACGCAGT TCCGGGAATG
GCTGAAGCTC TGCAAAAACG TCAATCCCAG GGGGTCGCTA AAGGTATTTT ATCGCGTAAA
GATCGCCTGT ACGTTGCCAA ACCCATTGTG CGGAACGGTC AATTCCTGGG TGTGCTGCGA
ATGTCAATTA CTTTGGAGCA ATTTCAGCGT CAGTTTGCAA GAGTGATTGT TAGTGTACTG
GGTAGCTTGG CGTTAACTAT CGTTTTATGC GCGTTGATTA GCACGCGCTT TGCTCGCAGT
CTTTCTAGAC CGATTGAAAT TATGGGTAAC TTCGCAATTC GGTTGGGTAG TGGTCAATTT
GGCGATACCT TAACTATCCA TGAGAATAAT GAATTGGATC AGCTAGCGGT GGAACTGAAC
CGGATGAGTG AAAGATTAGC CTCTCTAGAC CAAGAGCGCA GAACTTTTCT GGCAAATGTT
TCTCATGAAC TCCGCACACC TATTAGCAAT GTTCAGGTGA CAGTAGATGC ACTGAAAGGG
GGAGCTTACG AAGAACCTCA ATTGCGCGAT CGCTTTTTTC AAACAATTGA AAATGAAACT
AAACGTTTAT CACGACTGAT TCATGACCTG TTAGATTTAG GACGCTTAGA AGCGGGGGTC
AGCCAGCTAG AACAGCAAAA TTTATCATTA TCAGGTTTGA TCAACCGTGC GGTTAATGCT
ATGGAACCTA GAATGCAGGC TGCTGGCGTA TCATTGCAAG TTAAAGTAAG CGATTTACTC
ATCCAAGGTG ATCCAGAACG CCTATTACAA GCCATTTTGA ATTTACTGGA TAATGCCATC
AAACACTCAC AACCTGATTC TCAAGTCTTG ATTTCTGGCT ACAGCGACGG TAAACAAGCA
GTTATCAAAA TTCAAGACCA AGGCAAAGGC ATTCGGGAAC AGGATTTACC CCGGATTTTT
GAACAGTTTT ATACAACAGA TCCCTCACGC ACAGGTAAAA GTAGCGGTTT AGGACTAGCG
ATTACTAAAC GAATTATAGA AGCCCATCAA GGACGTATTA CAGCCAACAG CACTGCCCAT
CAAGGGGCAA CCTTTACCAT TTATCTCCCG TTGCCAGCAA AAAATAACTA A
|
|---|
| Protein sequence | MKGWWPAIKL NTIHSKLLAT YLLLIVLGTS CMASYILWSF HVYFMRSRQS DLENWTNALS
ESVADALEEK NLQRVNLLVQ RYGAPQNLTL RIFNQKGSLL ATSDPNLDQQ VQNWYAVPGM
AEALQKRQSQ GVAKGILSRK DRLYVAKPIV RNGQFLGVLR MSITLEQFQR QFARVIVSVL
GSLALTIVLC ALISTRFARS LSRPIEIMGN FAIRLGSGQF GDTLTIHENN ELDQLAVELN
RMSERLASLD QERRTFLANV SHELRTPISN VQVTVDALKG GAYEEPQLRD RFFQTIENET
KRLSRLIHDL LDLGRLEAGV SQLEQQNLSL SGLINRAVNA MEPRMQAAGV SLQVKVSDLL
IQGDPERLLQ AILNLLDNAI KHSQPDSQVL ISGYSDGKQA VIKIQDQGKG IREQDLPRIF
EQFYTTDPSR TGKSSGLGLA ITKRIIEAHQ GRITANSTAH QGATFTIYLP LPAKNN
|
|---|
| |