Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0772 |
Symbol | pgk |
ID | 3680359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 944845 |
End bp | 946047 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637716101 |
Product | phosphoglycerate kinase |
Protein accession | YP_321291 |
Protein GI | 75906995 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.608835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0127212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTAAAA AAACTGTGGC TAGTTTATCT GCTGCTGATA TTTCTGGTAA ACGCGCTTTA GTGCGTGTTG ACTTTAACGT GCCTTTAGAC GATCAAGGCA ACATCACAGA CGATACTCGC ATTCGTGCGG CTCTGCCAAC CATCCAAGAT TTGACGCAAA AGGGCGCTAA GGTCATTCTA GCAAGCCATT TCGGTCGTCC CAAGGGTGTA GATGAGAAAT TGCGTCTTAC CCCAGTAGCC AAGCGGCTAT CTGAGTTGTT GGGACAAGAA GTTGTCAAAA CTGATGACTC AATTGGTGAT GAAGTTGCGG CTAAGGTGGC GGCGCTGCAA AATGGCCAGG TTCTTTTATT AGAAAACGTC CGTTTTTATA AAGAAGAAGA GAAAAACGAT CCTGAATTTG CTAAAAAATT AGCTGCTAAT GCTGATTTCT ACGTAAACGA TGCTTTTGGT ACTGCACACC GCGCTCATGC TTCTACTGAA GGTGTGACTA AATTCCTCAG TCCATCTGTG GCTGGATATT TGGTTGAGAA GGAATTGCAG TATCTCCAAA GTGCGATCGA AAATCCCCAA CGTCCTTTAG CAGCCATTAT CGGTGGTTCT AAGGTTTCCA GCAAAATCGG TGTGATTGAA ACCCTACTAG AGAAGTGCGA CAAGCTGATC ATTGGTGGTG GGATGATTTT CACCTTCTAC AAAGCTCGTG GTTTGAATGT GGGTAAGTCG CTGGTGGAAG AAGACAAGCT AGAACTGGCG AAGTCTTTGG AAGCTAAGGC GAAGGAACGT GGCGTTAGCT TGTTGTTACC TACAGATGTG GTATTGGCAG ATAACTTTGC GCCTGATGCC AATTCTCAAA CCGTCAGCAT TGACAACATC CCCGATGGTT GGATGGGTTT GGATATCGGC CCTGATTCTG TCAAAGTCTT CCAAGAAGCC CTTGCAGATA CCAAAACCGT AATTTGGAAC GGGCCTATGG GTGTGTTTGA GTTTGATAAG TTTGCTGCTG GTACAGAAGC GATCGCTCAT ACACTAGCAG AGATTGGCAA AACTGGCACA ACTACCATCA TCGGCGGTGG TGACTCGGTA GCGGCTGTTG AAAAGGTTGG TTTGGCTGAT CAAATGAGCC ACATCTCCAC CGGTGGCGGC GCTAGCTTAG AGTTACTCGA AGGCAAAGTA CTGCCCGGTA TCGCTGCTTT AGATGAAGCG TAG
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Protein sequence | MSKKTVASLS AADISGKRAL VRVDFNVPLD DQGNITDDTR IRAALPTIQD LTQKGAKVIL ASHFGRPKGV DEKLRLTPVA KRLSELLGQE VVKTDDSIGD EVAAKVAALQ NGQVLLLENV RFYKEEEKND PEFAKKLAAN ADFYVNDAFG TAHRAHASTE GVTKFLSPSV AGYLVEKELQ YLQSAIENPQ RPLAAIIGGS KVSSKIGVIE TLLEKCDKLI IGGGMIFTFY KARGLNVGKS LVEEDKLELA KSLEAKAKER GVSLLLPTDV VLADNFAPDA NSQTVSIDNI PDGWMGLDIG PDSVKVFQEA LADTKTVIWN GPMGVFEFDK FAAGTEAIAH TLAEIGKTGT TTIIGGGDSV AAVEKVGLAD QMSHISTGGG ASLELLEGKV LPGIAALDEA
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