Gene Ava_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0750 
Symbol 
ID3679543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp927545 
End bp928378 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID637716079 
ProductSWIM Zn-finger 
Protein accessionYP_321269 
Protein GI75906973 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.607675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT ACACTTTACA AGCGAGCCGG GAATGGTGGT CACAAAGATG GCTCGATTTA 
TTAGATTCTT ATCGCTTTAA AAAACGTTTA GAACGAGCGC GGATATATTC TCGTCAAGGT
AATGTTTTGA GTATCGAGTT TAAAGGTGCA AAAGTATTAG CTAGAGTTCA GGGTAGTGAA
GAGGAGCCTT ATAAAGTATC CCTATCACTT GATCCATTTA GTGATGAGCA GTGGGGTTAT
GTAATTGAAA CTATGTCCCA AAAAGCTGTT TTCGCTGCCA AGCTATTAGC AGGAGAAATG
CCCCAAAATA TTGAGGAAGT ATTTACAACT AACGGGCTTT CATTATTTCC TTTCACTTTG
TCTGATGTCC ATAGTAAATG CTCCTGCCCT GATAAAGCCA ACCCTTGTAA ACACGTTGGT
GCAGTATACT ATCAATTAGG CGACAGATTT AGTGAAGATC CATTTGTATT GTTTCAATTA
CGTGGACGTA ATAAGGAAAA AATTATCAGC GATTTACGAC AACTACGTAA TGCAAAAATT
GAAACTAAAA TAACAGCAGC ATCTGAGCCT CAACAGCAAG TTACTCGAAC TCAATCTAAT
ATGAAATTGG ATTCTTGCTG GCGATATCAT GAACCACTTG AATCATCATT AGTTGTGATT
GCTCCCTCAA CTTCTGAAAC AGTGTTAGAT GTATTAGGAG CAGTTCCTCT AGTAAAAGAT
GAAGAAAGTT CAACAAATTT AAACTCTAGT GATGTAGTCA TGAAATATTT AGCAACCCTG
TACAAAGAAG TTGGACAGAA GGCTATGTTA GCGGCGATGA ATGTGGGCAG TTAA
 
Protein sequence
MTTYTLQASR EWWSQRWLDL LDSYRFKKRL ERARIYSRQG NVLSIEFKGA KVLARVQGSE 
EEPYKVSLSL DPFSDEQWGY VIETMSQKAV FAAKLLAGEM PQNIEEVFTT NGLSLFPFTL
SDVHSKCSCP DKANPCKHVG AVYYQLGDRF SEDPFVLFQL RGRNKEKIIS DLRQLRNAKI
ETKITAASEP QQQVTRTQSN MKLDSCWRYH EPLESSLVVI APSTSETVLD VLGAVPLVKD
EESSTNLNSS DVVMKYLATL YKEVGQKAML AAMNVGS