| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0720 |
|---|
| Symbol | rpmE |
|---|
| ID | 3679375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 890325 |
|---|
| End bp | 890564 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637716048 |
|---|
| Product | 50S ribosomal protein L31 |
|---|
| Protein accession | YP_321239 |
|---|
| Protein GI | 75906943 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0254] Ribosomal protein L31 |
|---|
| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000232123 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.569304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT CTGATATTCA TCCCAAGTGG TATCCAGAAG CAAAAGTCTA CTGCAATGGT
CAAGTTGTGA TGACCGTTGG TTCTACAAAA CCAGAATTAC ACGTAGATGT TTGGTCTGGC
AACCACCCAT TTTATACTGG TACTCAGAAA ATTATTGATA CCGAGGGTCG CGTAGAACGC
TTCCTGCGTA AGTATGGCAT GAGCAGCACT CAAACTTCTG GCGAACAAAA TAAAAAGTAG
|
|---|
| Protein sequence | MAKSDIHPKW YPEAKVYCNG QVVMTVGSTK PELHVDVWSG NHPFYTGTQK IIDTEGRVER
FLRKYGMSST QTSGEQNKK
|
|---|
| |