| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0715 |
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| Symbol | |
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| ID | 3678861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 887014 |
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| End bp | 887961 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716043 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_321234 |
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| Protein GI | 75906938 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000418191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAGT TTCAAATTGA ATGTGTAGAG TCTAATACAG AGGAAAGTCG GAATCATTAC
AGTAAATTTA TTCTAGAACC TCTAGAACGT GGTCAGGGAA CAACAGTCGG CAATGCGTTG
CGGCGGGTTT TACTATCCAA TCTAGAGGGA ACAGCCGTAA CAGCAGTGAG AATTGCAGGT
GTTTCTCACG AGTTTGCTAC AGTTCCAGGC GTGCGAGAGG ATGTCTTGGA AATCATCATG
CGGATGAAGG AAGTTATCCT CAAAAGCTAT TCATCGCAAG CCCAGATTGG CAGATTACTA
GTTAACGGCC CAACAACAAT CACTGCATCA CATTTTGATT TGCCCAGTGA GGTAGAAGTT
ATCGATCCTA CCCAATATGT CGCCACTATT GCTGAGGGCG GCAAACTGGA AATGGAATTC
CGCATCGAAA GAGGCAAAGG ATATCGCACA GTAGAAAGAG GGCGTGAAGA AGCCACGTCT
CTGGACTTTC TGCAAATTGA CTCCATCTTT ATGCCGGTGC GGAAAGTTAA CTACAGCGTT
GAGGAAGTGC GTGCAGATGG CTCCATTCCC AAGGACAGGC TTCTGTTAGA AGTTTGGACA
AATGGTAGCA TTTCTCCCCA AGAAGCTTTA TCTTCAGCAG CTGGAATTCT AGTTGATTTG
TTCAATCCGT TGAAAGATAT TTCCCTAGAA CCAACGGATA CAAACTCCGA CATTCCAGAC
GACCCCACTG CCCAAATTCC CATCGAAGAA TTGCAACTCT CTGTACGAGC TTATAACTGT
CTCAAGCGGG CGCAAGTCAA CTCTGTAGCT GACTTGTTGG ATTACACCCA AGAAGACTTG
TTAGAGATCA AAAACTTCGG TCAGAAGTCA GCAGAAGAAG TCGTGGAAGC TTTACAGCGA
CGCTTGGGCA TTACCTTACC CCAAGAAAGA AGCTCTAAAC ACAGCTAG
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| Protein sequence | MAQFQIECVE SNTEESRNHY SKFILEPLER GQGTTVGNAL RRVLLSNLEG TAVTAVRIAG
VSHEFATVPG VREDVLEIIM RMKEVILKSY SSQAQIGRLL VNGPTTITAS HFDLPSEVEV
IDPTQYVATI AEGGKLEMEF RIERGKGYRT VERGREEATS LDFLQIDSIF MPVRKVNYSV
EEVRADGSIP KDRLLLEVWT NGSISPQEAL SSAAGILVDL FNPLKDISLE PTDTNSDIPD
DPTAQIPIEE LQLSVRAYNC LKRAQVNSVA DLLDYTQEDL LEIKNFGQKS AEEVVEALQR
RLGITLPQER SSKHS
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