| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0705 |
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| Symbol | rplF |
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| ID | 3678851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 881164 |
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| End bp | 881712 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716033 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_321224 |
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| Protein GI | 75906928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000289089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGTA TTGGTAAACG TCCAATTACT GTACCAGCCA AAGTGCAAGT CACAATTGAT
GGCACCAAGG TTGTGGTTAA AGGCCCTAAA GGCGAACTGT CAAGAGAACT ACCTGTAAAC
GTTAGTGTTT CTCAAGAAGG AGAAACCTTA CAAGTAACTC GACGTGATGA AACTCGGACT
TCTAGACAAC TACACGGTTT AAGCCGGACT CTAGTTGCCA ACATGGTGGA AGGGGTTTCT
CAAGGTTTCC AACGCCGTTT AGAAATTCAA GGCGTGGGTT ATCGCGCTCA AGTTCAAGGG
CGTAACCTGA TTTTAAACAT GGGTTATAGC CATCAAGTCC AAATTGAACC ACCGGATGGG
ATTCAGTTTG CTGTCGAAAA TAACACCAAC GTTATAGTCA GTGGATATGA CAAGGAAATT
GTAGGTAACA CAGCAGCGAA AATCCGTGCC GTTCGTCCAC CAGAGCCTTA CAAGGGTAAA
GGTATCCGCT ACGCCGGTGA AGTGGTCAGA CGTAAAGCTG GTAAGACTGG TAAGGGTGGT
AAGAAGTAA
|
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| Protein sequence | MSRIGKRPIT VPAKVQVTID GTKVVVKGPK GELSRELPVN VSVSQEGETL QVTRRDETRT
SRQLHGLSRT LVANMVEGVS QGFQRRLEIQ GVGYRAQVQG RNLILNMGYS HQVQIEPPDG
IQFAVENNTN VIVSGYDKEI VGNTAAKIRA VRPPEPYKGK GIRYAGEVVR RKAGKTGKGG
KK
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