Gene Ava_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0703 
SymbolrplE 
ID3678849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp880097 
End bp880645 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content44% 
IMG OID637716031 
Product50S ribosomal protein L5 
Protein accessionYP_321222 
Protein GI75906926 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000777115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA CCAGACTCAA AACCTTATAT CAAGAGACAA TCATCCCCAA ATTAACCCAG 
CAGTTCCAAT ACACTAATGT TCATCAAGTA CCAAAATTGG TGAAAATTAC CGTGAACCGG
GGTTTAGGGG AAGCAGCTCA AAATGCTAAA TCCCTAGAAG CATCATTAAC CGAAATTGCT
ACTATTACTG GTCAAAAGCC AGTAGTCACA CGGGCGAAAA AGGCGATCGC TGGCTTTAAA
ATTCGTCAGG GTATGCCTGT TGGCATCATG GTGACACTAA GAGGCGAACG GATGTATGCT
TTCTTCGACA GACTGATTAG CCTATCACTA CCTAGAATTA GAGACTTCCG TGGTATCAGC
CCCAAAAGCT TCGACGGTCG TGGTAACTAT ACTCTAGGCG TAAGAGAACA GTTAATCTTT
CCAGAAATCG AATACGACAG CATCGATCAA ATCCGTGGTC TAGATATTTC TATCATCACC
ACAGCGAAAA ACGACGAAGA GGGCCGCGCC TTACTCAAAG AATTTGGAAT GCCCTTTCGC
GATCAATAA
 
Protein sequence
MATTRLKTLY QETIIPKLTQ QFQYTNVHQV PKLVKITVNR GLGEAAQNAK SLEASLTEIA 
TITGQKPVVT RAKKAIAGFK IRQGMPVGIM VTLRGERMYA FFDRLISLSL PRIRDFRGIS
PKSFDGRGNY TLGVREQLIF PEIEYDSIDQ IRGLDISIIT TAKNDEEGRA LLKEFGMPFR
DQ