Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0703 |
Symbol | rplE |
ID | 3678849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 880097 |
End bp | 880645 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716031 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_321222 |
Protein GI | 75906926 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000777115 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAA CCAGACTCAA AACCTTATAT CAAGAGACAA TCATCCCCAA ATTAACCCAG CAGTTCCAAT ACACTAATGT TCATCAAGTA CCAAAATTGG TGAAAATTAC CGTGAACCGG GGTTTAGGGG AAGCAGCTCA AAATGCTAAA TCCCTAGAAG CATCATTAAC CGAAATTGCT ACTATTACTG GTCAAAAGCC AGTAGTCACA CGGGCGAAAA AGGCGATCGC TGGCTTTAAA ATTCGTCAGG GTATGCCTGT TGGCATCATG GTGACACTAA GAGGCGAACG GATGTATGCT TTCTTCGACA GACTGATTAG CCTATCACTA CCTAGAATTA GAGACTTCCG TGGTATCAGC CCCAAAAGCT TCGACGGTCG TGGTAACTAT ACTCTAGGCG TAAGAGAACA GTTAATCTTT CCAGAAATCG AATACGACAG CATCGATCAA ATCCGTGGTC TAGATATTTC TATCATCACC ACAGCGAAAA ACGACGAAGA GGGCCGCGCC TTACTCAAAG AATTTGGAAT GCCCTTTCGC GATCAATAA
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Protein sequence | MATTRLKTLY QETIIPKLTQ QFQYTNVHQV PKLVKITVNR GLGEAAQNAK SLEASLTEIA TITGQKPVVT RAKKAIAGFK IRQGMPVGIM VTLRGERMYA FFDRLISLSL PRIRDFRGIS PKSFDGRGNY TLGVREQLIF PEIEYDSIDQ IRGLDISIIT TAKNDEEGRA LLKEFGMPFR DQ
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