| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0691 |
|---|
| Symbol | rplC |
|---|
| ID | 3678837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 874067 |
|---|
| End bp | 874702 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637716019 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_321210 |
|---|
| Protein GI | 75906914 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00208666 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGTAG GGATTCTCGG CACCAAGCTG GGCATGACCC AAATATTTGA CGAAGCAGGA
GTCGCAATTC CTGTCACAGT CGTACAAGTG GGTCCATGCG TTGTTACCCA AGTTAAAAGT
AAACAAACCG ACGGTTACGC TGCCATCCAA GTTGGTTATG GCGAAGTCAA ACCCAAGGCC
TTGAATAGAC CCTTACTAGG GCATTTAGCT AAATCATCTG CCCCAGCATT ACGGCATTTG
AAAGAGTATC ACACAGATAG CTCTAGCGAT TATGCTTTAG GTCAAGAAAT TAAAGCAGAT
ATTTTTAGTG CAGGTGAACT TGTAGACGTA ATCGGTACAA GTATCGGTCG CGGCTTTGCA
GGCAACCAAA AGCGGAATAA CTTTGGACGC GGGCCTATGT CTCACGGTTC TAAAAACCAT
AGAGCGCCCG GTTCCATCGG TGCAGGTACA ACCCCAGGAC GTGTCTATCC GGGTAAGCGG
ATGGCTGGTC GTTTAGGTGG TACTCGCGTC ACCATTCGCA AACTGACCGT AATCCGCGTT
GATGCAGAAC GCAACCTACT GCTAATTAAA GGAGCTGTTC CTGGTAAACC AGGTTCCTTA
CTAAGTATTG TACCTGCTAA AAAAGTTGGG AAGTAG
|
|---|
| Protein sequence | MSVGILGTKL GMTQIFDEAG VAIPVTVVQV GPCVVTQVKS KQTDGYAAIQ VGYGEVKPKA
LNRPLLGHLA KSSAPALRHL KEYHTDSSSD YALGQEIKAD IFSAGELVDV IGTSIGRGFA
GNQKRNNFGR GPMSHGSKNH RAPGSIGAGT TPGRVYPGKR MAGRLGGTRV TIRKLTVIRV
DAERNLLLIK GAVPGKPGSL LSIVPAKKVG K
|
|---|
| |