Gene Ava_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0686 
Symbol 
ID3678832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp869853 
End bp870311 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content44% 
IMG OID637716014 
Productpentapeptide repeat-containing protein 
Protein accessionYP_321205 
Protein GI75906909 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0322373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA AGCTATTCGC GGCCCTTGCC TTAGCAACTC CCCTATTTTT GGCTAACTCA 
GTAACAGCTG GGAATCCGCA AGATCTACAA AGGTTATTAT CAACTGGGGA ATGTAACGGG
TGTAATCTAA CAGGCATGAA CCTCAGTGGC GCTCATTTAA TTGGTGCTGA CTTACGAGGA
GCAAATTTAA CAGGTGCTAA CCTTTCTGGC GCTAACCTCG AAGGTGCTGA CTTAACTAAC
GCCAACTTAA AAAAAGCTAA CTTAACTTCA GCCTACCTAA CCAACGTCAA TTTCAAAAAA
GCTAACCTCA ATGGGGCAAA CTTGACTCGC GCCCATGTGA TCGACTCTAA TGTGTACGGT
GCATCAATGG ATAATCTCAC CATCACCGAT GCGGAAATTT ATAATACTGC GATCGGTATT
GGTGGTGAAG AAGCCCAAAA TATTCCTGAT TGGGATTAG
 
Protein sequence
MKLKLFAALA LATPLFLANS VTAGNPQDLQ RLLSTGECNG CNLTGMNLSG AHLIGADLRG 
ANLTGANLSG ANLEGADLTN ANLKKANLTS AYLTNVNFKK ANLNGANLTR AHVIDSNVYG
ASMDNLTITD AEIYNTAIGI GGEEAQNIPD WD