Gene Ava_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0683 
Symbol 
ID3678829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp865787 
End bp867412 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content43% 
IMG OID637716011 
Producthypothetical protein 
Protein accessionYP_321202 
Protein GI75906906 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAT CAGTATCAGA AATAAGAGTA CAAGATATTG ACCACTGCGG CATAGTGGCA 
GGGATAATAG ACCAAATGTG TTTGGTAGAA CAAATCAACC AAATACTAGG AACACACCAG
CAAGAAATAG TCAGTCCAGG TCAAGCAATT AAAGCGATGA TCCTCAACGG ATTGGGGCTG
TTAAGTGCGC CACTATACTT ATTTGAGAAG TTTTTTGTTG GCAAAGCCAC AGAACATTTA
CTAGGGGAAG GTATAAAAGC AGAACATTTA AATGATGACC GATTAGGCAG AGTCTTGGAC
AAACTGTATG AAGCCGGGTT AACACAAGTA TTTGTGACAG TAGCATTGGC AGCAGCAGAG
AAGTTTGGAG TGAAACACGA AAGTTTACAC CTAGACTCAA GCTCGTTTCA TGTACATGGA
GAATATGCAA ACAACTCAAC AGCAAATGAA GCTTCCCCTG GACAGATAAA AATTATCAAA
GGATACTCAA GAGATCACCG ACCAGACCTC AAACAGTTTA TTGTAGATTT GATGTGCAGT
GGGGATGGGG ATATTCCTCT GTACCTGCGA GTTGCAGATG GTAATGAAGC CGATTCGGCG
ATGTTTGCTC AAATCTTGAA AGAATTTCAT CAACAATGGG AAATAGATGC GCTATTTGTG
GCGGATGCAG CGCTGTATAG CCAAGACAAT CTCAAACAAA TGGATTCTTT GCGATGGATA
TCACGAGTTC CCGCAACACT GACGACAGCC CAAATGCTAA TGGAGAATAT AAGTCAGGAA
GCTTTTGTTG ATAGTGCAAT GACAGGCTAT CGGATAGCAG AGTGTGGCTG CGATTACGCT
GGAGTCAAAC AGCGTTGGCT GGTGGTGGAA AGTGAAGCTC GCACGGAGTC TGATTTAAAG
CAACTCGAAA AACGTCTCAT CAAGCAACTA GAGCAAGCGC AATCTCAACT ACGGCAGTTA
TCACAACAAG AATTTGCTTG TGCCGCAGAT GCGCTACAAG CAGCAAAGTG TTTTGAGACT
CAGCAACGCT TTCATCAACT TGCCCATTTG GAAGTTATCG AACACAAACG CCACGCCAAA
TCCGGCAGAC CGCGCAAAGA TGCTCAACCA CGACAGTCTC ATTATCAAAT TCGCGCTACT
GTTGTCGCCA ACGAGGTAGC CATTGCTACT GAAAAACAAC GTGCTGGACG ATTTATTCTG
GCTACCAATG TCCTGGATAC TTACCAATTG AGCAATGATG ACTTACTCCA GGAATACAAA
GCCCAGCAAT CGACTGAGCG CGGTTTTCGT TTTCTCAAAG ACCCTTTATT TTTTACCAGT
AGCGTTTTCC TTAACTCTCC ACAACGAGTT GCTGCTTTAG CAATGGTCAT GGGTCTGTGT
TTGTTAGTTT ACTCCTTGGG ACAACGGACT TTACGCCAAG CTCTTGCTCA AGCAAAACAG
ACTATCAATA ATCAGTTGGG TAAACCTACT GCTTCTCCTA CTTTGCGATG GGTATTTCAA
TGTTTCATGT CGATTCATCT AGTTACTCTT TCCGGCTTTG AGTACATTGC TAATCTTACT
GATGAGCGTC GATGGATTCT TCAATTTTTT GGTGCGCCTT GCCGAAAATA TTATCTTCTT
ACCTGA
 
Protein sequence
MTPSVSEIRV QDIDHCGIVA GIIDQMCLVE QINQILGTHQ QEIVSPGQAI KAMILNGLGL 
LSAPLYLFEK FFVGKATEHL LGEGIKAEHL NDDRLGRVLD KLYEAGLTQV FVTVALAAAE
KFGVKHESLH LDSSSFHVHG EYANNSTANE ASPGQIKIIK GYSRDHRPDL KQFIVDLMCS
GDGDIPLYLR VADGNEADSA MFAQILKEFH QQWEIDALFV ADAALYSQDN LKQMDSLRWI
SRVPATLTTA QMLMENISQE AFVDSAMTGY RIAECGCDYA GVKQRWLVVE SEARTESDLK
QLEKRLIKQL EQAQSQLRQL SQQEFACAAD ALQAAKCFET QQRFHQLAHL EVIEHKRHAK
SGRPRKDAQP RQSHYQIRAT VVANEVAIAT EKQRAGRFIL ATNVLDTYQL SNDDLLQEYK
AQQSTERGFR FLKDPLFFTS SVFLNSPQRV AALAMVMGLC LLVYSLGQRT LRQALAQAKQ
TINNQLGKPT ASPTLRWVFQ CFMSIHLVTL SGFEYIANLT DERRWILQFF GAPCRKYYLL
T