| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0679 |
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| Symbol | |
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| ID | 3678825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 860942 |
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| End bp | 862672 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716007 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_321198 |
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| Protein GI | 75906902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.874871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTAA ATCAGAAGCT CTACTTATAC TCAACCCTAG ATAATTTTCG ATTACTCAAC
AAAAATTACA CCGCCAAAAT TATGTTGGTG GCGTTTTTAG GGACTCACAT CCCGCTTTTA
ACTTTACTCT TCAGTTTCGT CATTTCTAAT TCTTACTCTT GGGAGATGAC AATTAGAGTT
TTGGTTATTG CTTTATTCGC TACGTTAATT GGTACGGTTG TTACCCTTTA TGCACTTCAC
CATCTGCTTA TTCCCGTCAA TTTGACATCC GCTACCCTGC GAGACTACCT CAATAACAAA
ACCTTACCCA ATCTGCCTAC AGAATTTGTG GATGAAGCGG GTACTCTCAT GGCAGATACA
TCCCAAACTC TCCACAAATT AGACGAGTTG ATTGACTATA TCAGCAATTA TGACAAACTT
ACAGGCTTGC CTAATCGGGA GCTATTGCGG GAACGTGTTA ATCAGGCTTT ATCCCAGCAG
TACAGCCAAA AAATGGTAGC TGTAATGGTA TTGGGAATTG ATGATTTTAC TGGCATAAGT
CATGCTTTAG AACATGAGCA ATCCAATTTA CTATTAAGAG CTGTAGGCCA GCGTTTGACC
AGTTGTTTAG CTCAGAAGGA CATTTTAGCT CATTTAAGTG GAGATGAATT TGCGATCGCC
AGGGTAGAAA TTCCTTCAAT TGAAAGTATC GTTAAGCTTT CACAACTGCT ATTATCTGCG
CTCAATAAAC CTTTCACTAT CAAAGGTGAC CAGATTCACA TCACAGCTAG CATCGGCATC
ACAATTAATC AACCAGATAA TCTTCATGAT GTAGATCAAC TTTTGCAGCA GGCTCATGTA
GCTTTGTATC AAGCCAAGCA ACAAGGGCGT AGCCAACACC AGTTCTATTC GCCAGAGATT
AACGCCCAAC TGCAAGAACG ATTAGCCTTA GAGAATGAAC TACATGGAGC ATTACAGCGA
AATGAAATAG TGGTTTATTA CCAACCCATC ATCGATTTAC AGACTCAGCA AATCACAGCC
GTTGAAGCAT TAGTACGCTG GCAACATCCT ACACGAGGTT TAGTATCTCC CGCCAAGTTT
ATTCCCATTG CTGAAGCCAA CGGCTTGATT GTGGAAATTG GCGAATGGGT ATTACGCACT
GCTTGTCTGC AAAACCGCGC TTGGCAACTT GCAGGACTTC CACCAATACG GATGTCAGTA
AACCTATCAG CTCGACAGTT TGAAGAATCA AATTTAGTAG AGCTTGTCGG TGAAATCATA
CAGGAGAGTG GTCTGCATCC ATCATATCTG GAACTGGAAG TCACTGAAAG TTCTTTAATG
GCAGACATTC AGCGCTCAGT AACAATACTC AAACAGTTAC GAGAATTAGG TGTATGGTTA
GCTTTAGATG ACTTTGGTAC TGGTTACTCT TCTCTCAACT ATCTGAAGCG CTTTCCCGTA
AATATGCTGA AAATTGATCG GTCATTTGTG CAGGATGTAT GTTCTAATCC TGATAGTGCT
GCGGTGACTA ACGCTATTAT TGCCCTAGCA AAAAGCTTAC AATTAAAAAT TACAGCCGAG
GGAATCGAAA CCCAACAACA GCTTAGTTAT TTACAAAAGC GTGGGTGTCA AGAAGGTCAG
GGATATTACT TTGGTATCCC TGCGCCTGCA AACGAAATTA CGGAAATATT GCAACCAGAA
GAGGCGAAAG AGGCAATGCT CTACGATAGG CCAGGGGTCA TTGCAGTCTA A
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| Protein sequence | MQLNQKLYLY STLDNFRLLN KNYTAKIMLV AFLGTHIPLL TLLFSFVISN SYSWEMTIRV
LVIALFATLI GTVVTLYALH HLLIPVNLTS ATLRDYLNNK TLPNLPTEFV DEAGTLMADT
SQTLHKLDEL IDYISNYDKL TGLPNRELLR ERVNQALSQQ YSQKMVAVMV LGIDDFTGIS
HALEHEQSNL LLRAVGQRLT SCLAQKDILA HLSGDEFAIA RVEIPSIESI VKLSQLLLSA
LNKPFTIKGD QIHITASIGI TINQPDNLHD VDQLLQQAHV ALYQAKQQGR SQHQFYSPEI
NAQLQERLAL ENELHGALQR NEIVVYYQPI IDLQTQQITA VEALVRWQHP TRGLVSPAKF
IPIAEANGLI VEIGEWVLRT ACLQNRAWQL AGLPPIRMSV NLSARQFEES NLVELVGEII
QESGLHPSYL ELEVTESSLM ADIQRSVTIL KQLRELGVWL ALDDFGTGYS SLNYLKRFPV
NMLKIDRSFV QDVCSNPDSA AVTNAIIALA KSLQLKITAE GIETQQQLSY LQKRGCQEGQ
GYYFGIPAPA NEITEILQPE EAKEAMLYDR PGVIAV
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