| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0669 |
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| Symbol | |
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| ID | 3678640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 850898 |
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| End bp | 852361 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637715997 |
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| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
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| Protein accession | YP_321188 |
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| Protein GI | 75906892 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.212683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.116073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAGAA AAATTTCTTT TGGCCTGATG GCATTATTTA TTAGTGTTCA AGTTAGTGTT
ACCCAGCAAC TAGTTAAAGC CCAAACCCCA ACTGCACCTA CACCCACCAC AAAATCTATT
TGCCCTGGGG AATTGGGAAC AGCCATAGAT ACAATAGTCA ATCGTCCCCT CTTCAATCGA
GTGCGCTGGG GTATCTTAGT CAAACCTCTG TCATCTGTGC AGACTCTCTA CAGCCGAGAC
GCTCAGAAAT ATTTTACTCC CGCTTCTAAT GCGAAATTAC TCACAACAGC TGCTGCATTA
CAACAACTAG GTGCAGACTT CCGCATTCGT ACCTCAATTT ATGAAAATGC CAACGGTAAC
TTCACTATTG TGGGTAGAGG TGACCCTAGC CTCAGTGATA CTCAACTGCA AGCATTGGCA
GAACAATTAA AACAGAAGGG TATCACCCAA ATTAGACAGT TAATTGCTGA TGATACTTAT
GTTCAAGGGG ATATTGTTAA CTCGACTTGG CAATGGGAAG ATGTGCAATC AGATTATGGT
GCGCCAGTTA ATAGCTTTAT TCTCAATCAA AATGTTTTTG GCTTAAAACT GACTCCTCAA
ACTGTAGGTA AAACTCCACA ATTATCATGG AACGATCCCA ATGAAGGCAG ACAATGGTTA
GTTATAAATA AATCTGTAAC AGTGGCAGCA AACCAACCAA GCTATATTGA AGTTACCCGT
GATTTAACAG GAAAAGTCCT GCGAATTCAA GGACAAGTAG CAGCCAATTC CACACCATAT
TTAGCAGAAC TACCTGTAGT TGATCCTAAT TATTATTTCT TGCGACGTTT ACGTACTATC
TTCACAACGG CAAAAATTAA CTTGGGAACA ACATTAGTTG CTAGTAGTAC TAATAATCAA
CAAGAAGTAG CTGCGGTACA GTCGCCACCC TTATCACAAT TACTGTTTGA AACTAATCAA
AATAGTAATA ATCTGTATGC TGAGGCATTG TTAAGGGCAT TGGCTTTCAA ACAACCTAGA
GTGCAAAATA AAAGTACTGC TAATATTGGC TTAGATGTTA TTAAAGTGAC CTTAGATAAA
TTAGGAGTTG ACCCAACAGG TTATGTTTTG ATAGATGCTT CTGGTTTATC ACGTCGTAAT
TTAGTCACCC CTGAGGCTTT AGTACAAACA TTACAAGGAA TAGCCAAAAC ACCAGCCGCC
AATGTATATC GTGCCTCCTT ACCTATCGCG GGGAAAAGTG GTACTTTGAG CAACCGCCTT
CGTAATACTC CGGCTGAAGG CATCGTACAA GCTAAAACTG GTACATTAAG CGGCGCAATA
TCTTTATCTG GATACGTAAA TAGCCCTCAA TATGAGCCTT TAGCATTTAG TATTATGGTG
AATCAATCGG AGCAGCCTGC AAGTGCTTTG CGCCAAGCCA TTGATGAGAT AGTTGTGTTA
TTGGCACAGA TAAAGCGTTG TTAA
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| Protein sequence | MPRKISFGLM ALFISVQVSV TQQLVKAQTP TAPTPTTKSI CPGELGTAID TIVNRPLFNR
VRWGILVKPL SSVQTLYSRD AQKYFTPASN AKLLTTAAAL QQLGADFRIR TSIYENANGN
FTIVGRGDPS LSDTQLQALA EQLKQKGITQ IRQLIADDTY VQGDIVNSTW QWEDVQSDYG
APVNSFILNQ NVFGLKLTPQ TVGKTPQLSW NDPNEGRQWL VINKSVTVAA NQPSYIEVTR
DLTGKVLRIQ GQVAANSTPY LAELPVVDPN YYFLRRLRTI FTTAKINLGT TLVASSTNNQ
QEVAAVQSPP LSQLLFETNQ NSNNLYAEAL LRALAFKQPR VQNKSTANIG LDVIKVTLDK
LGVDPTGYVL IDASGLSRRN LVTPEALVQT LQGIAKTPAA NVYRASLPIA GKSGTLSNRL
RNTPAEGIVQ AKTGTLSGAI SLSGYVNSPQ YEPLAFSIMV NQSEQPASAL RQAIDEIVVL
LAQIKRC
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