| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0666 |
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| Symbol | |
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| ID | 3678637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 847904 |
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| End bp | 848785 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715994 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_321185 |
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| Protein GI | 75906889 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.107374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0631773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCAAC CGCGCAATCG GTGGATAGTT CAACTCATCT TGGCGCTGGC AGTTCTAGCT
TTTGTGGGTG TTTCAGTTGT TCCTATTATT GGGGCGCTGA ATGATAATAC GTCACCCTCA
AACCAGAATA GTGCTAGTAA CCAAGGCAGC TCGCTCGCTT CTAATCAACA ATCCAAATTG
GCAGACGAAG TACGTGGATA TGAATTGGTT TTACAACGGG AACCAGAAAA TCAAACCGCA
TTGAAGGGTT TATTACAAGC ACGGCTGCAA CTTTTAGCGT TAAAACAAGG TAATGTCCAG
GGGGTGATAG AGCCTCTGGA AAAGCTAGCC AAGCTTAATC CTAATCAATC AGAGTATGGA
GTGCTATTAG CCCAAGCCAA ACAGCAAATT GGTGACAAAG AAGGGGCAGC TACAGCTTAT
CGCTCCATTT TGGATACCAA ACCCGGTGAT TTAAAAGCTT TGCAGGGGAT GGTAGTTCTT
TTATTAGATC AGCAACGTCC AGAAGCTGCT GTTGGCTTGT TGCAAGATAC CCTGACTAAC
GCTAACCAAG CCAACACCAT CCAGCCGGGG AGTGTGGATG TAGTGGCTGT ACAGGTGCTA
CTGGGTAATG TTCATGCTGC TCAGAAACGT TATCCTCAAG CGATTTCGGC ATTTGACCAA
GCAATTCAGA AAGATACAAA GGATTTTCGC CCAGTTTTGG CAAAGGCTAT GCTGTTGAAG
CAACAAGGAA AAGCAAGCGA GGCTAAACCT TTGTTTGATA GTGCTTTAGC TTTAGCGCCA
GCTCAATACA AAGATGAGAT TAATAAAGCA GCAACCGCAT CTCCCACTCT CACGCCGACT
GCACCTCCCG TTCCTACTCC TGAAAGTACT CCGAAGCAAT AA
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| Protein sequence | MSQPRNRWIV QLILALAVLA FVGVSVVPII GALNDNTSPS NQNSASNQGS SLASNQQSKL
ADEVRGYELV LQREPENQTA LKGLLQARLQ LLALKQGNVQ GVIEPLEKLA KLNPNQSEYG
VLLAQAKQQI GDKEGAATAY RSILDTKPGD LKALQGMVVL LLDQQRPEAA VGLLQDTLTN
ANQANTIQPG SVDVVAVQVL LGNVHAAQKR YPQAISAFDQ AIQKDTKDFR PVLAKAMLLK
QQGKASEAKP LFDSALALAP AQYKDEINKA ATASPTLTPT APPVPTPEST PKQ
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