Gene Ava_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0664 
Symbol 
ID3678635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp845262 
End bp846431 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content46% 
IMG OID637715992 
Producthypothetical protein 
Protein accessionYP_321183 
Protein GI75906887 
COG category[S] Function unknown 
COG ID[COG1900] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.120949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0723029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACTA TTGCGGAAAT TAATGAGAAA ATTAACCGTA AAACGGCGAT AGTCCTAACG 
GTTGAGGAAT TAAAGGCAAG AGTTGTAGAA GTTGGTGTGA GTAAAGTTGC TCAAGAGGTT
GACGTAGTTA CTACTGGCAC TTTTGAACCG ATGGAATCAA CTGGCGCTAT TCTCAATCTC
GGACACACTG ATCCACCAAT CAAAATTCGC CGTTGCTGGT TAGATGGTGT TCCAGCATAC
AGTGGTTTTG GGGCTGTTGA TTTATACCTG GGTGCTAGCT GTGCTGTTGA CGTGATGGAC
GGCGAAGAAG TCCGAGAACG TGGGGGCGGT CATGTCATAG AAGATTTAAT CGCAGGTAAA
CCTATACACG TCAGAGCGCA AGGACAGGTA ACTGACTGTT ATCCGCGAGC GAGTTTTGAA
ACCACAATTA CCCGCGACAC GATAAATCAG TTTTATTTAT TCAATCCGCG TAATCTCTAT
CAAAATTTTA TCGTAGGTGT GAATGGAGGC GATCGCCCAC TTCATACTTA TCTTGGCCCC
TTGCAACCAC GTTTGGGTAA TGCTGTTTAC TCCAACCCAG GGGCAATTTC TCCCCTGTTC
AATGACCCCA ACTTACAACT CGTTGGTATT GGCACAAGAA TTTTCTTAGG TGGTGGCATC
GGTTATGTGG CTTGGGAAGG GACTCAACAC TTTCCCTTAC AAAAGCGTTT AGCTAATCAA
ACACCTATTG GCCCGGCTGC GACTTTAGCT TTAATTGGTG ATGCCAAACA GATGGATGCT
CGTTGGGTGC GGGGTTGTTA TTTCAAAGGC TATGGCCCCT CGTTGATGTT GGGCGTAGGT
ATCCCACTGC CGGTGTTAAA TGAAGAGGTT ATAGAACACT GTGCAGTTCA AGACCAAGAT
TTAGTAGCGC CAATAGTAGA CTTTTCCATT CCTCGGCGCG TTCGTCCTAC ATTTGGTTTG
GTGAGTTACG CCCAACTCAA ATCTGGGCGT ATCACCATCG AGGGCAAAAC AGTAAGAGCT
GCTCCTTTGG CTAGTATGTT TCTAGCTCGA CAGGTAGCCT TAGAGTTAAA ACAGTGGATT
GAAGCAGGTA GTTTCACTCT CACGGAACCA GTAGCCCCGA TTCCCCAAGA ACGTTCGTTT
CTGCCTCAAG ACCGTTGGAC GGATTTTTAG
 
Protein sequence
MRTIAEINEK INRKTAIVLT VEELKARVVE VGVSKVAQEV DVVTTGTFEP MESTGAILNL 
GHTDPPIKIR RCWLDGVPAY SGFGAVDLYL GASCAVDVMD GEEVRERGGG HVIEDLIAGK
PIHVRAQGQV TDCYPRASFE TTITRDTINQ FYLFNPRNLY QNFIVGVNGG DRPLHTYLGP
LQPRLGNAVY SNPGAISPLF NDPNLQLVGI GTRIFLGGGI GYVAWEGTQH FPLQKRLANQ
TPIGPAATLA LIGDAKQMDA RWVRGCYFKG YGPSLMLGVG IPLPVLNEEV IEHCAVQDQD
LVAPIVDFSI PRRVRPTFGL VSYAQLKSGR ITIEGKTVRA APLASMFLAR QVALELKQWI
EAGSFTLTEP VAPIPQERSF LPQDRWTDF