Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0650 |
Symbol | |
ID | 3678679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 824045 |
End bp | 826450 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637715978 |
Product | signal transduction protein |
Protein accession | YP_321169 |
Protein GI | 75906873 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.190918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCGA TCGCGTTGGG GTTTTTGTAT AAGTTAGTAT ATAACTTGTA TAATTTGTAT AATAACGGAC AAATTGTTGT CATGGCAAAG CGATCGCTCC AAGCCTCTGC TGAAGGTATT AGAAAAGCAA AGCAGGCTTT TAAGCGCAAA GGATGGACAC AAGAATATCT GGCGGCGGAA GTTGGTTTAG AAACACGCCA GTCAATATGG AAATTTTTCA CTGGTAAACC TATAGATCGT CACGTCTTTA ATGATATTTG CTTTGCGCTG GAACTGGATA CAGCAGAAAT TTCCCAACAA TCTGTTGAAA ATTCTTTATA TTTAGAAGGT GACGAATATA GCCTAATAGA TATTAATATT CTGGTACAAA AACTACGCTC TATTCATCAC GAAAAAATTC AGGCTCAATG TAGCACATTA CATCTTTTAG ATATTGCTAG ACCAATTTCA CTTAATGATA TTTATATTGA TGTCAACATC AGCGAGGAAA TTTCTAGTAA AAGATGGTTA GATATTCAAG ATTTACAAAA GGTGGGTTCT TATACAATTA TTTCTCCCAT TTTTGCACAA CGAGACCAAA AATTAATCGG GGGTTTAGAA GCTCTAAAAA AATATTCTAA ACTGATATTA TTGGGAAAAT TAGGCTCAGG TAAGACTACA TTTTTACAAT CAGTCGCTCT TAGTTGCAGT CAAGGAATAT TTCAGCCAAA TTACTTACCT ATTTTTGTCA ATCTCAAAAA TTTTGCGGAA GATGCTAAAG ACTCTCGGCA ACTTAGCTTA TTTAAATATA TACTCGACCA GGTGATAAAT TTTGGCATTA CTGAAGGAGA ATTGAAAACT GTATTATCTC ATGGTAGAGC TTTAATTCTG TTAGATGGAT TAAATGAATT TATCAGCCAC AACTATGAAA AAAATATTAA TAGAATTAAC GGTTTCATCC AAAAATTTTA TAAAAATCAA ATAGTTATTA CTTGCCGTAC AGGCACAAAT TATTCTAATT TTCATGGTTT TACAGAAGTA GAAATTACTG ATTTTGATAA AACAAAAATT ACCGAATTTG CTAATAAATG GTTCTTGATA GTCGCCAATA ATTCTCCAGA AAAATCGAGA TTTCTAGCAC AAAAATTTGT ACAAAGACTC GAACTAGAAG AAAATCATCG TCTTCTTGAG TTAGCTAACA GACCAGCCTT ATTGATTCTT TGTTGTTTGG CATTCCAGTC TGCGACAGAT TTCCCTTTTC ATCATTTTGA AATTTATAAA CAAGCATTGG ATCTGCTTTT AGTACGCTAC GATGACGTAA GAGGAATTCA AAACAATCAA ACTGTGACTA ATTTATCTCT GCTGCACAAA ATCAAGCTAC TTAGTCACAT AGCAGCAATT AGCTTTCATC AAGGGGATTA TTTTCTCACT GAAACAAAAC TCCAGCAAGT CATCACTGAA TATCTACTCC ATCAAAGCAA CACCATAACT GATACAGATG CTTTAGAACT GGAGAGTACT GCAATCATCA AAACAATTGA ATTACAGCAT GGTTTATTAG TTGAAAGAGC AAAAGGCATT TACTCTTTTT CTCATCTCAT ATTTCAAGAG TATTTTATAG CTAGAGAAAT CGTAGCTAAT GCTAATCATC AAACGCTGCA AGAGTTAGTT AGCCATTTAT CTGAACAACG ATGGCATCAG GTATTTTTGC TAGTTGTGTG GATGCTACAA CCAGTAGATG ATTTATTAAA ATTAATCAAA GAAAAGATTG ATAATATAGC TGTCGGAAAT GGCAATTTAT ATCATTTTAT GCAATGGGTA GAACACAAGT CTGCTCAAGT AGGTTATGTA TACCATCCTG CCAGTGTACG TGCTTTTTAT TTTAGTATAG CTTTACCTCC AGAGCATCCC TTAGCTTGTA ACCAAGATTT AGCAATATCC TTAGAGCATC AGTTTACTGG TAGTTTGTCT ATAGACTTAG CATTAGATTT GGCTTTAACT AATGCACTAA CGGTGAGTAT GACAATGACG GCTGATATAT TTTTTGCTAG GTTATCTACT TTAAATTTAG CTCTAGACTT GAAGCACTTA TTAGTCAATC AGGTGTCGTT AAATAATTCA CTGCAAAATA TTAGAAACCA GTTACCCTCT TCTAGTCAAG GGAGAGAATA CTTAAAAGCT TGGTGGCTAG CAAATGGACA AGCATGGACT GAAGAATTAC GAGATATGAT GATTAATGAG CGTAAGATTG GACTTAATTG GCAGTTCGGA AAACAAGATT TACAAGATTT GCAACAGTAT TGGGATGCCA GCAAATTACT AATAAATTGT CTAAAATTTG CTAGAGATAT TTCACCTACT TTACGTTATG AATTAGAGAC AAGTTTATTT TTAGCTAAAC AATGTCAATT AAATGTAATT ACGTAG
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Protein sequence | MFAIALGFLY KLVYNLYNLY NNGQIVVMAK RSLQASAEGI RKAKQAFKRK GWTQEYLAAE VGLETRQSIW KFFTGKPIDR HVFNDICFAL ELDTAEISQQ SVENSLYLEG DEYSLIDINI LVQKLRSIHH EKIQAQCSTL HLLDIARPIS LNDIYIDVNI SEEISSKRWL DIQDLQKVGS YTIISPIFAQ RDQKLIGGLE ALKKYSKLIL LGKLGSGKTT FLQSVALSCS QGIFQPNYLP IFVNLKNFAE DAKDSRQLSL FKYILDQVIN FGITEGELKT VLSHGRALIL LDGLNEFISH NYEKNINRIN GFIQKFYKNQ IVITCRTGTN YSNFHGFTEV EITDFDKTKI TEFANKWFLI VANNSPEKSR FLAQKFVQRL ELEENHRLLE LANRPALLIL CCLAFQSATD FPFHHFEIYK QALDLLLVRY DDVRGIQNNQ TVTNLSLLHK IKLLSHIAAI SFHQGDYFLT ETKLQQVITE YLLHQSNTIT DTDALELEST AIIKTIELQH GLLVERAKGI YSFSHLIFQE YFIAREIVAN ANHQTLQELV SHLSEQRWHQ VFLLVVWMLQ PVDDLLKLIK EKIDNIAVGN GNLYHFMQWV EHKSAQVGYV YHPASVRAFY FSIALPPEHP LACNQDLAIS LEHQFTGSLS IDLALDLALT NALTVSMTMT ADIFFARLST LNLALDLKHL LVNQVSLNNS LQNIRNQLPS SSQGREYLKA WWLANGQAWT EELRDMMINE RKIGLNWQFG KQDLQDLQQY WDASKLLINC LKFARDISPT LRYELETSLF LAKQCQLNVI T
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