Gene Ava_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0650 
Symbol 
ID3678679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp824045 
End bp826450 
Gene Length2406 bp 
Protein Length801 aa 
Translation table11 
GC content34% 
IMG OID637715978 
Productsignal transduction protein 
Protein accessionYP_321169 
Protein GI75906873 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.190918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCGA TCGCGTTGGG GTTTTTGTAT AAGTTAGTAT ATAACTTGTA TAATTTGTAT 
AATAACGGAC AAATTGTTGT CATGGCAAAG CGATCGCTCC AAGCCTCTGC TGAAGGTATT
AGAAAAGCAA AGCAGGCTTT TAAGCGCAAA GGATGGACAC AAGAATATCT GGCGGCGGAA
GTTGGTTTAG AAACACGCCA GTCAATATGG AAATTTTTCA CTGGTAAACC TATAGATCGT
CACGTCTTTA ATGATATTTG CTTTGCGCTG GAACTGGATA CAGCAGAAAT TTCCCAACAA
TCTGTTGAAA ATTCTTTATA TTTAGAAGGT GACGAATATA GCCTAATAGA TATTAATATT
CTGGTACAAA AACTACGCTC TATTCATCAC GAAAAAATTC AGGCTCAATG TAGCACATTA
CATCTTTTAG ATATTGCTAG ACCAATTTCA CTTAATGATA TTTATATTGA TGTCAACATC
AGCGAGGAAA TTTCTAGTAA AAGATGGTTA GATATTCAAG ATTTACAAAA GGTGGGTTCT
TATACAATTA TTTCTCCCAT TTTTGCACAA CGAGACCAAA AATTAATCGG GGGTTTAGAA
GCTCTAAAAA AATATTCTAA ACTGATATTA TTGGGAAAAT TAGGCTCAGG TAAGACTACA
TTTTTACAAT CAGTCGCTCT TAGTTGCAGT CAAGGAATAT TTCAGCCAAA TTACTTACCT
ATTTTTGTCA ATCTCAAAAA TTTTGCGGAA GATGCTAAAG ACTCTCGGCA ACTTAGCTTA
TTTAAATATA TACTCGACCA GGTGATAAAT TTTGGCATTA CTGAAGGAGA ATTGAAAACT
GTATTATCTC ATGGTAGAGC TTTAATTCTG TTAGATGGAT TAAATGAATT TATCAGCCAC
AACTATGAAA AAAATATTAA TAGAATTAAC GGTTTCATCC AAAAATTTTA TAAAAATCAA
ATAGTTATTA CTTGCCGTAC AGGCACAAAT TATTCTAATT TTCATGGTTT TACAGAAGTA
GAAATTACTG ATTTTGATAA AACAAAAATT ACCGAATTTG CTAATAAATG GTTCTTGATA
GTCGCCAATA ATTCTCCAGA AAAATCGAGA TTTCTAGCAC AAAAATTTGT ACAAAGACTC
GAACTAGAAG AAAATCATCG TCTTCTTGAG TTAGCTAACA GACCAGCCTT ATTGATTCTT
TGTTGTTTGG CATTCCAGTC TGCGACAGAT TTCCCTTTTC ATCATTTTGA AATTTATAAA
CAAGCATTGG ATCTGCTTTT AGTACGCTAC GATGACGTAA GAGGAATTCA AAACAATCAA
ACTGTGACTA ATTTATCTCT GCTGCACAAA ATCAAGCTAC TTAGTCACAT AGCAGCAATT
AGCTTTCATC AAGGGGATTA TTTTCTCACT GAAACAAAAC TCCAGCAAGT CATCACTGAA
TATCTACTCC ATCAAAGCAA CACCATAACT GATACAGATG CTTTAGAACT GGAGAGTACT
GCAATCATCA AAACAATTGA ATTACAGCAT GGTTTATTAG TTGAAAGAGC AAAAGGCATT
TACTCTTTTT CTCATCTCAT ATTTCAAGAG TATTTTATAG CTAGAGAAAT CGTAGCTAAT
GCTAATCATC AAACGCTGCA AGAGTTAGTT AGCCATTTAT CTGAACAACG ATGGCATCAG
GTATTTTTGC TAGTTGTGTG GATGCTACAA CCAGTAGATG ATTTATTAAA ATTAATCAAA
GAAAAGATTG ATAATATAGC TGTCGGAAAT GGCAATTTAT ATCATTTTAT GCAATGGGTA
GAACACAAGT CTGCTCAAGT AGGTTATGTA TACCATCCTG CCAGTGTACG TGCTTTTTAT
TTTAGTATAG CTTTACCTCC AGAGCATCCC TTAGCTTGTA ACCAAGATTT AGCAATATCC
TTAGAGCATC AGTTTACTGG TAGTTTGTCT ATAGACTTAG CATTAGATTT GGCTTTAACT
AATGCACTAA CGGTGAGTAT GACAATGACG GCTGATATAT TTTTTGCTAG GTTATCTACT
TTAAATTTAG CTCTAGACTT GAAGCACTTA TTAGTCAATC AGGTGTCGTT AAATAATTCA
CTGCAAAATA TTAGAAACCA GTTACCCTCT TCTAGTCAAG GGAGAGAATA CTTAAAAGCT
TGGTGGCTAG CAAATGGACA AGCATGGACT GAAGAATTAC GAGATATGAT GATTAATGAG
CGTAAGATTG GACTTAATTG GCAGTTCGGA AAACAAGATT TACAAGATTT GCAACAGTAT
TGGGATGCCA GCAAATTACT AATAAATTGT CTAAAATTTG CTAGAGATAT TTCACCTACT
TTACGTTATG AATTAGAGAC AAGTTTATTT TTAGCTAAAC AATGTCAATT AAATGTAATT
ACGTAG
 
Protein sequence
MFAIALGFLY KLVYNLYNLY NNGQIVVMAK RSLQASAEGI RKAKQAFKRK GWTQEYLAAE 
VGLETRQSIW KFFTGKPIDR HVFNDICFAL ELDTAEISQQ SVENSLYLEG DEYSLIDINI
LVQKLRSIHH EKIQAQCSTL HLLDIARPIS LNDIYIDVNI SEEISSKRWL DIQDLQKVGS
YTIISPIFAQ RDQKLIGGLE ALKKYSKLIL LGKLGSGKTT FLQSVALSCS QGIFQPNYLP
IFVNLKNFAE DAKDSRQLSL FKYILDQVIN FGITEGELKT VLSHGRALIL LDGLNEFISH
NYEKNINRIN GFIQKFYKNQ IVITCRTGTN YSNFHGFTEV EITDFDKTKI TEFANKWFLI
VANNSPEKSR FLAQKFVQRL ELEENHRLLE LANRPALLIL CCLAFQSATD FPFHHFEIYK
QALDLLLVRY DDVRGIQNNQ TVTNLSLLHK IKLLSHIAAI SFHQGDYFLT ETKLQQVITE
YLLHQSNTIT DTDALELEST AIIKTIELQH GLLVERAKGI YSFSHLIFQE YFIAREIVAN
ANHQTLQELV SHLSEQRWHQ VFLLVVWMLQ PVDDLLKLIK EKIDNIAVGN GNLYHFMQWV
EHKSAQVGYV YHPASVRAFY FSIALPPEHP LACNQDLAIS LEHQFTGSLS IDLALDLALT
NALTVSMTMT ADIFFARLST LNLALDLKHL LVNQVSLNNS LQNIRNQLPS SSQGREYLKA
WWLANGQAWT EELRDMMINE RKIGLNWQFG KQDLQDLQQY WDASKLLINC LKFARDISPT
LRYELETSLF LAKQCQLNVI T