| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0647 |
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| Symbol | |
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| ID | 3678676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 815727 |
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| End bp | 820952 |
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| Gene Length | 5226 bp |
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| Protein Length | 1741 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715975 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_321166 |
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| Protein GI | 75906870 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.294056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTC TACCTCAACT TCTCTGGCCA CCATGCTTAG AGTCAGTTAT TGACCTTTCG
CCACTGACGG TTGAGCCGGA AATGCCATTG TCAGATGCAG TTTCCCAAAT GGCAAAGCAA
GGTGCTGCTA TTGTTGTGGT TGCCAATACT CAGATATTAG GGTGGTTATC AGAAAGAGAT
GTGGTAAAGC TGGTAGCCTT GGGTGTTGAC TTGCAAACAA CCACAATTTC GCAGGTGATG
AACACCTCAA TCATATTTTT CCAGGTTGCT CAATTTGAGG ATATTGGGGC AATTATTTCT
CTGTTACGTC AACATCAATC GAGTTGCTTG TTAGTGGTTG ATGAACAAGA GCAACTAATG
GGAACAATTA CCTCTGAAAG TATTTATCAA GCTCTGGGAG CAGCAACGGA GTTGAATAGC
CAAGAAGAAC TAGAAACCTC GCAACAAGAT TTTCAGTTGC TAAAGTCAGC AGTAGTTAAT
CCTCTCGATG CAATTGGGGC TAGTGACGAG AGCCTTTGGC GTGTGGCTAA TACTGCGCCA
ATATTAATTT GGATATCCGC TACAGATACG TCATGTATTT TTTTCAACAA AGCCTGGTTA
GAGTTGACTG GCAGTACCCT AGAGCAAGAA ATAGGTAAAA GTTGGTCAGA AAAGTTGCAT
CCAGAAGATT TACAAGGTTT TTTAGATGTT TACTTGTCAG CTTTTCATAC TCATCAGTTT
TTCTCCGTGG AATATCGACT ACTAGGATTG AATGGAGAGT ACCTTTGGCT ACTAAATATT
GGGGTTCCCA GATTTACATC TAATGGTGAT TTTGCTGGTT ATATTAATTC TTGTATAGAT
ATTACTGAAC ACAAGCAATA CTTTGCTGCA TTAGAGGAGA GTACAAACAG ACTCAAACTA
GCGCTAGAGG CGACCAATAC AATTTACTGG GAGCGAAATC TTAGTAATGA CCAGTTATTC
TTTCTAAATC CTGTTATTGA ATTCGGAGAT AGTGAGGAAT TAACTCATAG CGAGGTTATG
TCTTTTTTCC ATCCAGATGA CAGGGAAAAA GTGGATATGG CTGCACAAGA AGCGATCGCC
AATTGTAGTT GTTTAGAAAT AGAACATCGG CTGCCAGTAG CAGGGCAACC GTCTAAATAT
AAATGGTTTC TTTCAAAATC TACAATTCTC ACGGATACAA CAGGTAAACC CACTCGGATG
ATCGGCATTT CGATGGATAT TACCGACCGA GTAGAAGCAC AAGATGCACT AGAACAAGCC
AACCAAGAGT TAGAACGGCG AGTAGCAGAG CGCACCTTAG CCTTGCAGAA AGCAAATAGA
CAACTGCTGG CGGAAATTGG CGATCGCCAA ATCGCTCAAG AGCAACTACG GCAATCTCAA
CAAATGTTGC AGTTAGTCAT AGATACGATT CCCCATTGTG TTTTTTGGAA AGATCGAAAT
TCCGTCTTTT TGGGCTGTAA TCGTAAATTT GCCAAATTGT TAGGTTTTGA TTATCCAGAA
AATATTATAG GAAAAACAGC CCACGATTTT CTCGCCAATC TTCAGGATGC AGACTTACAC
CGCCAGAGCG ATGTTAGGGT CATCGAAACG AATACCCCTG AGTATCACAT AGTAGAACCC
CTCCTGAAAC CAAATGGACA AAAAATTTGG CTAGAAAAAA ATAAAATTCC ACTCCATGAT
CCTAAAGGTA ACGTTGTAGG TATTCTTAGC ACTTTGGAAG ATATTACTGA ACGCAAGCAA
GTACAAGAAG CTTTAGAAAA AAGTGAAGAA CGCTTTCGAT TTTTAGCTGA ATCTATCCCC
CAACAGGTAT GGATAGCTCG ACCAGATGGC TACCTTGAAT ATGTGAACCG ACGCACCCTT
GAATACTTTG GTAATGTACC AGAAGCCATA CTAGGCTGGA AATGGCAGCA ATCGATACAT
CCTGATGATC GCAACCGTTG CTTGGAAATT TGGCAGCATT GTGTAGCCAC TGGTGAACCC
TTAGATGTAG AATTTCGCTG GTTAAGGACA ACAGATCAAA CCTATCGCTG GCACATAGGA
CGCGCCTTAG CACTACGCGA TTCTCAAGGT AATATCATCA ATTGGTTCGG GACAAATACA
GATATTGATG ATCGCAAACG GACAGAAGAA GCCCTGGCAG AAAGGGTAAA ATTGTCAGAC
TTCCGCTCAG CAGTTGATAC AATTCTCACT CAAAGTTACA CCCTACAGGA TTTAATGCAC
GGCTCTGCTG ATGCAGTAGT TAAACATCTC AATGCCGCCT TTGCTAGAAT CTGGATACTC
AATAAACAAG AAAATTTACT GGAATTACAA GTTAGTTCGG GAAGATACAC CCACCTAGAT
GGATCTCATA GATGTATACC AGTCGGTCAA TGCAAAATCG GTTTAATTGC CCAAATAGGA
AAGCCTCACC TCACCAATTC TGTACAAACA GATCCGCTTA TCAGTAACCC AGATTGGGCC
AAGCAAGAAG GAATAGTTGC CTTTGCCGGT TATCCCCTAA TTGTGGAGAA TGAGACATTA
GGAGTGATTG CCATGTTTTC TTGCCAAGCA CTCAGTGAAT CTCATTTCCA AGCTTTGGGA
ATTGCAGCTA ATCAGATCGC TATTGGTATC AAGCGTCAAC AAACGGAAGC AGCTCTCAGG
CATAGCGAAG AAAGGTTCCG CAACTTAGTT GAAACTAGTA GTGATTGGGT GTGGGAAGTT
GATGAAAACG CTATCTATAC TTACGTTAGT CCTAAAGCCA AAGATATTTT AGGTTACGAA
CCACAAGAAT TATTGGGTAG AACTCCATTA GACATGATGC CACCAACAGA AGCAGAACGT
GTCATGAAGA TTTTTAATTC CATTATTGCA GCACAACAGC CCTTTAAATG TCTTGAGAAC
ACCAATGTTC ATCAAGATGG TCATTTAGTG GTTCTCGAAA CTAGTGGAGT GCCGATTTTT
GATGCGGTGG GGAAATTTTG TGGTTATCGC GGGGTGGATC GAGATATTAC TGCTCGTAAG
GAAGTAGAAA CGAACTTATA TCAAACTCAA CAGCAATTAC AAGTAATTTT GGATAACTCC
CCAGCCATAA TTTATGTCAT GGATTTGCAA AACCGATTTA TCTTGGTGAA TCAACAATAT
GAAAAACTAT TCCACACCAC TCAATCTGAA ATTGTAGGCA AAAGTGTATA TGAGACTTGG
CCTGATGATA TTGCTTATCA ATATGCCATT AACAACCGTC AAGTTATTAC CACTGGTATG
GCGATAGAAG TTGAAGAAAT GGTTCCCCAA GAAGATGGTC TACATACATA TTTAAGTATT
AAGTTTCCTT TAAAAGACCG TAATGGCATC ATTTATGCAA TGTGTGGCAT TTCTACAGAC
ATTACAGAGC GTAAATTGGC AGAAGATTCA CTTCTCCGTT TCCACAAAGC GATGGAAAGT
ACAAGTGATG CTATTATCTT TGGTGATATT TTGAATATCA GTAATTATGC TAACCCAAGT
TTTCAGGAAT TATACGGTTA TAATCTAGAG CAATTACAAG CGGCAGGGGG GGTATGCACA
ATTTTCCAGG AGCCTCAAAA GCAACGAGAA ATCATGGCTA GGGTGATGAA AGGGGAATCT
TGGCGGGGTG AAGTGGCCAT GCGATCGCGC GATGGCCATT TATTACAAGT TGATCTGAGG
GCAGATGCCA TTAGAGACAG CAATGGTAAA ATCATAGGCA CTGTATGTAT CCATACAGAC
ATAACCAAAC GCCAGCAGGT AGAAGAAGGT TTAAAATTGC GCGATCGGGC GATCGATGCT
AGCAGTAATG GCATCATTAT TGCTGATGCT AGCACTCCCA ACAGACCCAT TATCTATGTG
AATCCTGCCT TTGAGCGCAT GACTGGCTAC TCTTCAGACG AAGTGATAGG ACAAAACTTC
CGTTTATTCC AAAGTGCAGA TATCGATCAA CTAGGATTAC GAGAACTGAG TACGGCCATG
CAGGCAGGTA AGGCTTGCAC TGTAGTTCTA CGGAACTATC GCAAAGATGG CAGCCTCTTA
TGGAACGAGT TAAACATCTC CCCTGTTTAT GATCAAACTG GTCAACTTAC CCACTATATA
GGCATTCAAA CAGATATCAC AGAACGTAAA CAAGCAGAAA CAGCACTACT TGTCAGCCAA
CAGCGACTAC AATATTTACT GACATCTAGC CCGGCTGTGA TTTATACCTG CAAAACCTGT
GGAGATTTTG GCAGTATTTT TGTTAGTAAC AACATCACCA CCATAACTGG TTATGAAGCC
CAAGAATTTA TAGAAAATTC AGACTTTTGG TTCAATCATA TCCATCCGGA AGACGCACCA
TCAGTCCTTA AAAAACTTTC CAGTGTCTTG GAAGCGGAAA CTTACAAATT GGAATATCGA
TTTTTACACA AAGATGGCAC ATATCATTGG CTATATGACC AAAGAAGGGT GGTGAAAGAT
GACACAAAGA ATCCAGTGGA AATGGTCGGT TACTTAATAG ATATTACAGA CCGCAAACAA
CTCGAAGAAT ACTTAAAAGT AGCACTCGAA AAAGAGAAAG AATTGAGCGA ACTTAAATCT
CGCTTCGTAT CCATGACTTC CCACGAATTC CGCACGCCGT TAAGTACCAT TTTATCTTCT
TCTGAATTAC TAGAACACTA CCGCCACAAA TGGACAGAGG AAAAACAACT CACTCACTTA
CATCGTATTC AAACTGCCGT CAAGCGGATG ACGGAAATGT TAAATGACAT TTTAATCATT
GGAAAGGCAG AAGCGGGGAA ACTAGAGTTT ATGCCTAAAC CCCTTGATGT CGTCGCCTAT
TGTCGAAATT TAGTAGAAGA AATCCAGCTA AACCTGAATA ATAAGCAAGT TGATTTTATC
AGTGAATATC AATCTATGTC ATGTTGCATG GATGAAAAAT TATTAGGACA TATTCTTATT
AACTTAATCT CCAATGCTAT TAAATATTCT CCAGTCAATA GTAATGTTCA AGTTAAATTT
TATTGTCGAG ATCAATGTGC AGTATTTGAA GTTCACGATT GGGGTATTGG TATTCCAGCA
GAAGATATTA CGCACTTATT TGAATCATTT TATCGAGCGA AGAATGTTGG CAATATCTTA
GGTACAGGGT TAGGATTAGC AATCGTTAAA AAATGTGTAG ATGTTCACGA AGGGGAAATA
TCTGTTTCTA GTAACTCAGA AATTGGTACT CTATTTACTG TGAATATTCC TTTAAAACAA
CAATAA
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| Protein sequence | MQSLPQLLWP PCLESVIDLS PLTVEPEMPL SDAVSQMAKQ GAAIVVVANT QILGWLSERD
VVKLVALGVD LQTTTISQVM NTSIIFFQVA QFEDIGAIIS LLRQHQSSCL LVVDEQEQLM
GTITSESIYQ ALGAATELNS QEELETSQQD FQLLKSAVVN PLDAIGASDE SLWRVANTAP
ILIWISATDT SCIFFNKAWL ELTGSTLEQE IGKSWSEKLH PEDLQGFLDV YLSAFHTHQF
FSVEYRLLGL NGEYLWLLNI GVPRFTSNGD FAGYINSCID ITEHKQYFAA LEESTNRLKL
ALEATNTIYW ERNLSNDQLF FLNPVIEFGD SEELTHSEVM SFFHPDDREK VDMAAQEAIA
NCSCLEIEHR LPVAGQPSKY KWFLSKSTIL TDTTGKPTRM IGISMDITDR VEAQDALEQA
NQELERRVAE RTLALQKANR QLLAEIGDRQ IAQEQLRQSQ QMLQLVIDTI PHCVFWKDRN
SVFLGCNRKF AKLLGFDYPE NIIGKTAHDF LANLQDADLH RQSDVRVIET NTPEYHIVEP
LLKPNGQKIW LEKNKIPLHD PKGNVVGILS TLEDITERKQ VQEALEKSEE RFRFLAESIP
QQVWIARPDG YLEYVNRRTL EYFGNVPEAI LGWKWQQSIH PDDRNRCLEI WQHCVATGEP
LDVEFRWLRT TDQTYRWHIG RALALRDSQG NIINWFGTNT DIDDRKRTEE ALAERVKLSD
FRSAVDTILT QSYTLQDLMH GSADAVVKHL NAAFARIWIL NKQENLLELQ VSSGRYTHLD
GSHRCIPVGQ CKIGLIAQIG KPHLTNSVQT DPLISNPDWA KQEGIVAFAG YPLIVENETL
GVIAMFSCQA LSESHFQALG IAANQIAIGI KRQQTEAALR HSEERFRNLV ETSSDWVWEV
DENAIYTYVS PKAKDILGYE PQELLGRTPL DMMPPTEAER VMKIFNSIIA AQQPFKCLEN
TNVHQDGHLV VLETSGVPIF DAVGKFCGYR GVDRDITARK EVETNLYQTQ QQLQVILDNS
PAIIYVMDLQ NRFILVNQQY EKLFHTTQSE IVGKSVYETW PDDIAYQYAI NNRQVITTGM
AIEVEEMVPQ EDGLHTYLSI KFPLKDRNGI IYAMCGISTD ITERKLAEDS LLRFHKAMES
TSDAIIFGDI LNISNYANPS FQELYGYNLE QLQAAGGVCT IFQEPQKQRE IMARVMKGES
WRGEVAMRSR DGHLLQVDLR ADAIRDSNGK IIGTVCIHTD ITKRQQVEEG LKLRDRAIDA
SSNGIIIADA STPNRPIIYV NPAFERMTGY SSDEVIGQNF RLFQSADIDQ LGLRELSTAM
QAGKACTVVL RNYRKDGSLL WNELNISPVY DQTGQLTHYI GIQTDITERK QAETALLVSQ
QRLQYLLTSS PAVIYTCKTC GDFGSIFVSN NITTITGYEA QEFIENSDFW FNHIHPEDAP
SVLKKLSSVL EAETYKLEYR FLHKDGTYHW LYDQRRVVKD DTKNPVEMVG YLIDITDRKQ
LEEYLKVALE KEKELSELKS RFVSMTSHEF RTPLSTILSS SELLEHYRHK WTEEKQLTHL
HRIQTAVKRM TEMLNDILII GKAEAGKLEF MPKPLDVVAY CRNLVEEIQL NLNNKQVDFI
SEYQSMSCCM DEKLLGHILI NLISNAIKYS PVNSNVQVKF YCRDQCAVFE VHDWGIGIPA
EDITHLFESF YRAKNVGNIL GTGLGLAIVK KCVDVHEGEI SVSSNSEIGT LFTVNIPLKQ
Q
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