| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0645 |
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| Symbol | |
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| ID | 3678674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 813122 |
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| End bp | 814174 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715973 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_321164 |
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| Protein GI | 75906868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.446085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.634764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACTC TGTCCCCCAA CCTCAAAGCT AGACTTTCCC AACCCCTAAA CATCGGCTCG
TTTGTAGTTA AAAGCCGTGT TCTTCAGTCG CCTTTGTCGG GGGTGACAGA TATGGTGTTT
CGCCGTCTAG TACGTCGCTA TGCACCCGAT TCGATGATGT ATACAGAAAT GGTGAATGCT
ACGGGTTTAC ACTACGTCCA GCAGTTACCA AAAATTATGG AAGTAGACCC CAACGAGCGA
CCAATCAGTA TTCAGTTGTT TGACTGTCGT CCCGATTTTT TGGCAGAAGC AGCAATCAAA
GCCGTTGCGG AAGGCGCTGA TACGATTGAT ATCAATATGG GGTGTCCGGT AAATAAAATT
ACCAAAAACG GCGGAGGTTC TTCTTTACTA CGACAGCCGG AAGTTGCAGA AGCCATTGTA
CGGGAAGTAG TAAAAGCTGT TAATGTGCCG GTCACTGTCA AAACCCGGAT TGGCTGGAAT
GACAGAGAAA TTACCATTCT CGATTTTGCC AAGCGCATGG AAGACGCTGG AGCGCAAATG
ATTACGGTGC ATGGACGTAC CCGCGCTCAA GGTTACAATG GCAATGCCCG TTGGGAATGG
ATAGCCCGTG TCAAAGAAAT ACTTTCCATC CCCGTGATTG GTAATGGCGA TATATTTTCC
GTAGAATCGG CGGTGAAATG TTTAGAAGAA ACGGGTGCTG ATGGTGTGAT GTGTTCCCGT
GGGACTTTAG GTTATCCGTT TTTGGTGGGG GAAATTGACC ATTTCTTAAA GACTGGTGAA
CTCCTGACAG CACCAACCCC AATTCAACGT TTGGAATGTG CTAGAGATCA CTTACAAGCC
TTATGGGAAT ATAAAGGCGA TCGCGGTGTC CGTCAAGCCC GCAAGCACAT GACTTGGTAT
GCTAAAGGTT TTGTCGGTGC GGCTGAGTTG CGTGGACAAT TAAGCGTAAT TGAAACAGTC
CAACAAGGTT TAGATTTGAT TGACAAAGCC ACTGAAAAGC TAACTCATGG TTATGAGCTA
GTGGAGGAAG CTGATAATTT TCAGGTAGCT TAA
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| Protein sequence | MVTLSPNLKA RLSQPLNIGS FVVKSRVLQS PLSGVTDMVF RRLVRRYAPD SMMYTEMVNA
TGLHYVQQLP KIMEVDPNER PISIQLFDCR PDFLAEAAIK AVAEGADTID INMGCPVNKI
TKNGGGSSLL RQPEVAEAIV REVVKAVNVP VTVKTRIGWN DREITILDFA KRMEDAGAQM
ITVHGRTRAQ GYNGNARWEW IARVKEILSI PVIGNGDIFS VESAVKCLEE TGADGVMCSR
GTLGYPFLVG EIDHFLKTGE LLTAPTPIQR LECARDHLQA LWEYKGDRGV RQARKHMTWY
AKGFVGAAEL RGQLSVIETV QQGLDLIDKA TEKLTHGYEL VEEADNFQVA
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