Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0639 |
Symbol | |
ID | 3678668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 805689 |
End bp | 806672 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715967 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_321158 |
Protein GI | 75906862 |
COG category | [S] Function unknown |
COG ID | [COG4243] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.631797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.153578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGCC GCCGTTCTAC TCCTTGGATT CATAAATGGT CGCGTCTAAT AATTGCCGCG ATCGCCGGAT TTGGCGCTCT CAATACCGGT TATCTAACTA TAGAAAAGTT AACAGGAGGT AGCCCAGCTT GTGTAGCACA AGCTGGTGTT AAGAGTTGTA CTGACGTACT TTCCAGCCCC TGGGCAACAA TTTTAGGACA ACCATTAGCC TTGTTTGGGT TTTTAGCGTA CACCAGTATG TTGGTGTTAG CATTAGCACC TGTTGTTTGG AAAGGTGGAG AAAACAACAA CCGCAAACAA CTAGAAAACG TGACATGGTG GCTACTGCTG GTAGGTGCGA TCGCCATGTC TGTTTTTAGT GGCTATTTAA TGTATTTACT GGCATTTGAA ATTAAAGCTC TGTGCCTTTA TTGTATTAGT TCGGCTTTAT TTTCCCTTAG CCTTTTGGTA CTAACAATTG TTGGGCGTTC TTGGGAAGAT ATTGGACAAA TCTTATTTAC TGCTTTGATC GTGGGTATGG TAACCCTGAT TGGTACTCTA GGAGTTTACG CAGGTATTAA TAAACCGGAT GTTACCTCTG CCAATATACC TCCTGGACAA CTAGCACCTT TTGTTCCCAA AACCAATCCT AACCCAGAAT TTGGTTGGGA AATTAATACT ACTTCCGGTG AGGCAGAAAT TGCCTTAGCA CAGCATTTAG TTAAGGTAGG TGCTAAGGAA TATGTGGCTT ATTGGTGTCC TCACTGCCAT GACCAGAAAC TACTTTTTGG GAAAGATGCT TACCAAATCA TCAGTGACAA CATTAAGATA GAGTGTGCTG ATGATAGTCC CAAGGGTCAG CCAGAATTGT GTCGAGCCGC AAAAATACAG GGTTTCCCCA CTTGGATTAT TAATGGTCAA ACCTATAGTG GAGTACAGAA CCTTTCGGAA TTAGCCAAAA TCACAGGTTA TACAGGGCCA AGCAACTTCA AGTACTTTAA GTAA
|
Protein sequence | MIRRRSTPWI HKWSRLIIAA IAGFGALNTG YLTIEKLTGG SPACVAQAGV KSCTDVLSSP WATILGQPLA LFGFLAYTSM LVLALAPVVW KGGENNNRKQ LENVTWWLLL VGAIAMSVFS GYLMYLLAFE IKALCLYCIS SALFSLSLLV LTIVGRSWED IGQILFTALI VGMVTLIGTL GVYAGINKPD VTSANIPPGQ LAPFVPKTNP NPEFGWEINT TSGEAEIALA QHLVKVGAKE YVAYWCPHCH DQKLLFGKDA YQIISDNIKI ECADDSPKGQ PELCRAAKIQ GFPTWIINGQ TYSGVQNLSE LAKITGYTGP SNFKYFK
|
| |