Gene Ava_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0639 
Symbol 
ID3678668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp805689 
End bp806672 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content42% 
IMG OID637715967 
Productthioredoxin domain-containing protein 
Protein accessionYP_321158 
Protein GI75906862 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.631797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.153578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC GCCGTTCTAC TCCTTGGATT CATAAATGGT CGCGTCTAAT AATTGCCGCG 
ATCGCCGGAT TTGGCGCTCT CAATACCGGT TATCTAACTA TAGAAAAGTT AACAGGAGGT
AGCCCAGCTT GTGTAGCACA AGCTGGTGTT AAGAGTTGTA CTGACGTACT TTCCAGCCCC
TGGGCAACAA TTTTAGGACA ACCATTAGCC TTGTTTGGGT TTTTAGCGTA CACCAGTATG
TTGGTGTTAG CATTAGCACC TGTTGTTTGG AAAGGTGGAG AAAACAACAA CCGCAAACAA
CTAGAAAACG TGACATGGTG GCTACTGCTG GTAGGTGCGA TCGCCATGTC TGTTTTTAGT
GGCTATTTAA TGTATTTACT GGCATTTGAA ATTAAAGCTC TGTGCCTTTA TTGTATTAGT
TCGGCTTTAT TTTCCCTTAG CCTTTTGGTA CTAACAATTG TTGGGCGTTC TTGGGAAGAT
ATTGGACAAA TCTTATTTAC TGCTTTGATC GTGGGTATGG TAACCCTGAT TGGTACTCTA
GGAGTTTACG CAGGTATTAA TAAACCGGAT GTTACCTCTG CCAATATACC TCCTGGACAA
CTAGCACCTT TTGTTCCCAA AACCAATCCT AACCCAGAAT TTGGTTGGGA AATTAATACT
ACTTCCGGTG AGGCAGAAAT TGCCTTAGCA CAGCATTTAG TTAAGGTAGG TGCTAAGGAA
TATGTGGCTT ATTGGTGTCC TCACTGCCAT GACCAGAAAC TACTTTTTGG GAAAGATGCT
TACCAAATCA TCAGTGACAA CATTAAGATA GAGTGTGCTG ATGATAGTCC CAAGGGTCAG
CCAGAATTGT GTCGAGCCGC AAAAATACAG GGTTTCCCCA CTTGGATTAT TAATGGTCAA
ACCTATAGTG GAGTACAGAA CCTTTCGGAA TTAGCCAAAA TCACAGGTTA TACAGGGCCA
AGCAACTTCA AGTACTTTAA GTAA
 
Protein sequence
MIRRRSTPWI HKWSRLIIAA IAGFGALNTG YLTIEKLTGG SPACVAQAGV KSCTDVLSSP 
WATILGQPLA LFGFLAYTSM LVLALAPVVW KGGENNNRKQ LENVTWWLLL VGAIAMSVFS
GYLMYLLAFE IKALCLYCIS SALFSLSLLV LTIVGRSWED IGQILFTALI VGMVTLIGTL
GVYAGINKPD VTSANIPPGQ LAPFVPKTNP NPEFGWEINT TSGEAEIALA QHLVKVGAKE
YVAYWCPHCH DQKLLFGKDA YQIISDNIKI ECADDSPKGQ PELCRAAKIQ GFPTWIINGQ
TYSGVQNLSE LAKITGYTGP SNFKYFK