Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0638 |
Symbol | |
ID | 3678667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 802769 |
End bp | 804982 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715966 |
Product | diguanylate cyclase |
Protein accession | YP_321157 |
Protein GI | 75906861 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0991066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC AACTAGGGAA TCCTATTGTG AGGTTAATTC TGGGACTAAA GCAATGGCTG AGTCGAGGAC GAAGAGAATT AATTACTGCT TCCGTCGTTT TGGTTTGTGT CCTGATACTG CGTTCTATAG GATTACTGCA ATCCGTAGAA TTGTCTGCAT TAGACCAATT TTTTCGCCTC AGACCAAACG AACAGCCTGA TAATCGCATT ACTATCGTAG CCATTGATGA AGCTTCCTTA CATAAAGGAT TTCCCATTCC TGACGGCATC ATTGCTAATT TATTAAAAAA ATTACAAGCC AATCAACCTC GTGTTATTGG TTTAGATATT TATCGAGATT TGCCAACCAA AGATGGCCAT GAAAATTTAG TTGATACTTA TAAAACAATA CCTAATTTAG TCGGTACACA ATTATTATCA AATGATAAAA GTTATAAAGT TGCGCCACCA CCACAATTAA ATTCCCAACA AATAGGTTTT AATAACTTAC TCTATGACCC AGACGGCAAA GTACGCCGAA TTTTGTTGTA CTGGCATATT GGTGAAAATT ATTATGAAAG CTTTGCTTTA AAGTTAGCTT TATTATATTT AAAATCAGAG AAAGTTTTTC CTAGAAAAGC AGCTAATAAC CCGGAGTATT TACAGTTAGG TAAGTCAGTT TTTCCTCGAT TTGAACAAAA TGATGGTGCT TACGTTAGAG CTGATGACAA GGGTACTCAA ATTCTGTCTA ATTTTCCTAA ACCAGGTTGT CGAAATTCGT CTTTAGATTC CTGCGGTTTC CAAAAGGTTA GTATGCTAGA TGTGCTAGAT GATAAGGTGC CGCGCAGTTG GATAGAGGAT CGCATTGTCT TAATCGGCTC TACTGCTCCT AGCCTCCAAG ATTTTGTATT TATTCCTTAT TCAAGTCGTT GGATGAGAGC AGCAAAACCT GTGGCTGGGA TTGAACTGCA AGCTTATTTT ATTAGTCAGT TAATTTCTGC GGCTTTGGAA GGAAGACCTG TATTAAAAGT GTGGTCTGAT TTTTGGGAAT ACTTGTGGAT TTTTGCTTGG TCATATTTAG GAGCAGTAGC AGCATGGCGA ATACGGGGAA AAATTCCCAA TATCGTGGCG ATATTTGTTG CTTGCTGCTT GCTTTTTTTA AGTGCTTATC TAGCTTTTTT ATCAGGGTGG TGGATACCAT TAGTTCCAGC ACTGCTGACC TTGGTTGGTT CAGTAATTTG GATGATTAAT TATCTTGCTC ATATGCAGGA AGAGTTAAAG CGTTCCAAAG AATTTTTACA GCAAGTAATT GATACGATCG CTGACCCAAT TTTTGTAAAA AATGAGCAAC ATCAGTGGAT TGTTTTAAAT AAGGCTTACT GTCGATTTAT TGGTTATCCT GAGAGTTTTT TAGTTGAAAA GTCAGATGTT GATTTTTTCC CTAAACATGA AGCTGATGTT TTTCGACAGC AAGATGAGTT AGTGTTTGAC ACTCAAAAAC CTCAGGAAAA TGAGGAAGAA TTTACTGATG CTTATGGAAA AACTCATTTA ATTGCTACTA AGCGATCGCT CCACAAGGAT GCAGCCGGTA ATTTATTTTT AGTTGGGGTG ATCAGAGATA TTACTCAGCG CAAATTGATG GAGGAAGAAC TCAAGCGCAC GGCAGCTGAG TTGTTTCGCT CTAATAACGA ATTAAAACTG AAGGAAGACC ATTTGCGTTA TTTAGCTTAT CACGACGCTT TGACCGGTCT TCCAAACCGT AAATATTTTG CGGAACAACT TTACGAGTCC ATTAATTGGG CAAAAGATAA CAATTTCTCC CTTGGACTTT TATTTATTGA CTTAGACGGC TTTAAGCAGG TTAATGACAG CCTTGGTCAC GAAATGGGCG ATCGCTTGTT GGTGGTGATA GCTCAAAGAC TCAGCAATTC TTTACGCGCT AGTGATACAG TGGCTCGCTT AGGTGGCGAC GAATTTACCG TCATTCTACA GGCGATACCT AACGTGCAAG TAGCAGCCAA AGTCGCTGAA AAAATTCTAG CGAATATCAC TGAGCCAATT GTTTTGAACG GATGTACTAC TAAAGTTTCT GTCAGCATTG GTATTAGTAT TTACCCAGAA ACCAGTTTAG ATCCTGATAC ATTGCTAAAA AAAGCGGATG CAGCCATGTA CCGCGCCAAA CATTTAGGGA AAAATCGCTT TGAATTGGCA GATAGGGGAA ATACTGAGTC CTGA
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Protein sequence | MSKQLGNPIV RLILGLKQWL SRGRRELITA SVVLVCVLIL RSIGLLQSVE LSALDQFFRL RPNEQPDNRI TIVAIDEASL HKGFPIPDGI IANLLKKLQA NQPRVIGLDI YRDLPTKDGH ENLVDTYKTI PNLVGTQLLS NDKSYKVAPP PQLNSQQIGF NNLLYDPDGK VRRILLYWHI GENYYESFAL KLALLYLKSE KVFPRKAANN PEYLQLGKSV FPRFEQNDGA YVRADDKGTQ ILSNFPKPGC RNSSLDSCGF QKVSMLDVLD DKVPRSWIED RIVLIGSTAP SLQDFVFIPY SSRWMRAAKP VAGIELQAYF ISQLISAALE GRPVLKVWSD FWEYLWIFAW SYLGAVAAWR IRGKIPNIVA IFVACCLLFL SAYLAFLSGW WIPLVPALLT LVGSVIWMIN YLAHMQEELK RSKEFLQQVI DTIADPIFVK NEQHQWIVLN KAYCRFIGYP ESFLVEKSDV DFFPKHEADV FRQQDELVFD TQKPQENEEE FTDAYGKTHL IATKRSLHKD AAGNLFLVGV IRDITQRKLM EEELKRTAAE LFRSNNELKL KEDHLRYLAY HDALTGLPNR KYFAEQLYES INWAKDNNFS LGLLFIDLDG FKQVNDSLGH EMGDRLLVVI AQRLSNSLRA SDTVARLGGD EFTVILQAIP NVQVAAKVAE KILANITEPI VLNGCTTKVS VSIGISIYPE TSLDPDTLLK KADAAMYRAK HLGKNRFELA DRGNTES
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