Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0630 |
Symbol | |
ID | 3678659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 791228 |
End bp | 792349 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715958 |
Product | geranylgeranyl reductase |
Protein accession | YP_321149 |
Protein GI | 75906853 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.685888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACA CCATCATCGT TGGTGCTGGG CCTGCGGGTG GCGCAGCAGC ATATCATCTA GCCAAGAAAG GGCGTTCAGT ATTAGTTTTA GAAAAAGAGT CTCTACCTAG ATATAAACCA TGTGGCGGGG GAGTGTCACC AATAGTTGCC GAATGGTTTG ACTTTGACTT TAGCCCAGCA ATTTCTCTGA AAGTAGACTC ATTTCGTTTT ACCTGGAACT TAGAAGACCC CGTAGAAGCG AAGATTGAGA CTAAAGAACC AGTGTGGATG GTACGCCGAG AAGTTTTTGA CCATTTTCTA GTACAGCAAG CGCAAAAACA AGGCGCAGAA CTGCGGGATA ATACAGAAGT TACAGGAATT GAGTTTAAGA GCGACTACTG GCAAGTTAAC ACCGCTAACG GCCCCGTTAC TGGGCGCTAT CTCATCGCTG CTGACGGTGC TAAAGGCCCA ATGGCAAAAT GGTTAGGCTT CAAAGAACGT AAACGCCGTT TAGCTGGTGC ATTAGAAGCA GAAGTTCCCG CCCAAGTAAA AGATAAATCG ACAATTCACT TCGAGTTTGG TTTAGTGAAA AACGGTTATA TCTGGAACTT CCCCAAAGAA GAAGGTTATT CCATTGGAGT AGGAACCTTT ATTGGTGGTC AACCCCAAGA TTTTAAGAAA ATTTTGGTTG AATACTCCCA ATTATTTAAC ATAGATGTCA AAACTAGTAA GCAATATGGT CATCCAATTG CTCTATGGGA TGGTAATCAA AAATTACACA CTCAAAACGC TATTTTGGCA GGGGAAGCAG CTTGTGTAGT TGACCCCATG ACGGCCGAAG GGATTCGTCC CTCAATTTAT AGCGGTGTCA TGGCCGCCGG AGCCGTTGAT CAAGCACTTT CTGGTGATAT CAACGCTTTG GAACAATACA CCGAAATCAT TCAGGAAAGT TGGGGTGCGG AAATGGCTTG GGCGCAAAAA TTAGCAGGGG CATTCTATCG CTTTCCTAGC GTTGGTTATC AAGTTGGTGT CAAGCGTCCC ACTGCACCCA AAGTTATGGG TAAAATCCTC TGTGGTGAAA TGTCTTACAG CAGCGTTGCT GGTCGCGCTC TCAAGCGTCT AATCCCTGGC TTTAGAGGTT AG
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Protein sequence | MYDTIIVGAG PAGGAAAYHL AKKGRSVLVL EKESLPRYKP CGGGVSPIVA EWFDFDFSPA ISLKVDSFRF TWNLEDPVEA KIETKEPVWM VRREVFDHFL VQQAQKQGAE LRDNTEVTGI EFKSDYWQVN TANGPVTGRY LIAADGAKGP MAKWLGFKER KRRLAGALEA EVPAQVKDKS TIHFEFGLVK NGYIWNFPKE EGYSIGVGTF IGGQPQDFKK ILVEYSQLFN IDVKTSKQYG HPIALWDGNQ KLHTQNAILA GEAACVVDPM TAEGIRPSIY SGVMAAGAVD QALSGDINAL EQYTEIIQES WGAEMAWAQK LAGAFYRFPS VGYQVGVKRP TAPKVMGKIL CGEMSYSSVA GRALKRLIPG FRG
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