Gene Ava_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0630 
Symbol 
ID3678659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp791228 
End bp792349 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID637715958 
Productgeranylgeranyl reductase 
Protein accessionYP_321149 
Protein GI75906853 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.685888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACA CCATCATCGT TGGTGCTGGG CCTGCGGGTG GCGCAGCAGC ATATCATCTA 
GCCAAGAAAG GGCGTTCAGT ATTAGTTTTA GAAAAAGAGT CTCTACCTAG ATATAAACCA
TGTGGCGGGG GAGTGTCACC AATAGTTGCC GAATGGTTTG ACTTTGACTT TAGCCCAGCA
ATTTCTCTGA AAGTAGACTC ATTTCGTTTT ACCTGGAACT TAGAAGACCC CGTAGAAGCG
AAGATTGAGA CTAAAGAACC AGTGTGGATG GTACGCCGAG AAGTTTTTGA CCATTTTCTA
GTACAGCAAG CGCAAAAACA AGGCGCAGAA CTGCGGGATA ATACAGAAGT TACAGGAATT
GAGTTTAAGA GCGACTACTG GCAAGTTAAC ACCGCTAACG GCCCCGTTAC TGGGCGCTAT
CTCATCGCTG CTGACGGTGC TAAAGGCCCA ATGGCAAAAT GGTTAGGCTT CAAAGAACGT
AAACGCCGTT TAGCTGGTGC ATTAGAAGCA GAAGTTCCCG CCCAAGTAAA AGATAAATCG
ACAATTCACT TCGAGTTTGG TTTAGTGAAA AACGGTTATA TCTGGAACTT CCCCAAAGAA
GAAGGTTATT CCATTGGAGT AGGAACCTTT ATTGGTGGTC AACCCCAAGA TTTTAAGAAA
ATTTTGGTTG AATACTCCCA ATTATTTAAC ATAGATGTCA AAACTAGTAA GCAATATGGT
CATCCAATTG CTCTATGGGA TGGTAATCAA AAATTACACA CTCAAAACGC TATTTTGGCA
GGGGAAGCAG CTTGTGTAGT TGACCCCATG ACGGCCGAAG GGATTCGTCC CTCAATTTAT
AGCGGTGTCA TGGCCGCCGG AGCCGTTGAT CAAGCACTTT CTGGTGATAT CAACGCTTTG
GAACAATACA CCGAAATCAT TCAGGAAAGT TGGGGTGCGG AAATGGCTTG GGCGCAAAAA
TTAGCAGGGG CATTCTATCG CTTTCCTAGC GTTGGTTATC AAGTTGGTGT CAAGCGTCCC
ACTGCACCCA AAGTTATGGG TAAAATCCTC TGTGGTGAAA TGTCTTACAG CAGCGTTGCT
GGTCGCGCTC TCAAGCGTCT AATCCCTGGC TTTAGAGGTT AG
 
Protein sequence
MYDTIIVGAG PAGGAAAYHL AKKGRSVLVL EKESLPRYKP CGGGVSPIVA EWFDFDFSPA 
ISLKVDSFRF TWNLEDPVEA KIETKEPVWM VRREVFDHFL VQQAQKQGAE LRDNTEVTGI
EFKSDYWQVN TANGPVTGRY LIAADGAKGP MAKWLGFKER KRRLAGALEA EVPAQVKDKS
TIHFEFGLVK NGYIWNFPKE EGYSIGVGTF IGGQPQDFKK ILVEYSQLFN IDVKTSKQYG
HPIALWDGNQ KLHTQNAILA GEAACVVDPM TAEGIRPSIY SGVMAAGAVD QALSGDINAL
EQYTEIIQES WGAEMAWAQK LAGAFYRFPS VGYQVGVKRP TAPKVMGKIL CGEMSYSSVA
GRALKRLIPG FRG