| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0622 |
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| Symbol | |
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| ID | 3678651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 783050 |
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| End bp | 785218 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715950 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_321141 |
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| Protein GI | 75906845 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.44571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.575885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATC TCTTCAAACT CCGAAAAAAT TACCCCTGTG TTTTACAGTT GAGTGAAGAA
GATTGTGGAG CCGCTTGTAT AGTTTCAATT TGTCGACAAC ACGGACGCTT TTTAAGTATG
AATAAAAGCC GTGAAGCAGT AGGGACTGGA CAACTAGGTA CAACCTTATT AGGTCTAAAA
CGTGGCTCAG AAAATCTCGG TTTTAATGCC AGAGCCGTGA AAGCATCCCC CGCCATCTTA
GACAGAATTA AAGAAATTCA ACTACCAGCA ATTATTCATT GGCGGGGATA TCACTGGGTA
GTGTTATATG GCAAAAAGGG AAGCAAATAT ATCATCGCTG ATCCAGCAGT AGGTATTCGT
TATATTCACA GAGAAGAGTT AACAGCCGCG TGGAATGGGG TCATGCTCCT AATGGAGCCA
GATCACCAGC GCTTTTCTCA ACAGCCCCAC GACAAACCAC AACCAGGCTT TACCCGCTTT
CTTCAGCGCA TCTTGCCCTA TCATGGGCTA TTGTCCCAGG TTTTTATGAT CAACATTGTC
CTGGGCGTAT TGGCTTTAGG CTCACCAGTC CTGATTCAAA TCCTCACAGA TGATGTCTTA
GTTCGTGGCG ATACTCAACT ACTAGCTGTG ATAGCGATCG CTGTTATCAT CATGAATTTA
TTTAGTAGTG GTATGCAGGT ATTAGAATCT ACAATGATTG CTCATTTTAG CCAACGCCTG
CAATTAGGTT TAGTCTTGGA ATTTGGACGG AGAATTCTGC AATTACCATT GACTTATTAC
GAAGCCCGTC GCAGTGGAGA GATTACCAGC CGACTTAGAG ATATTAATGA AATTAATCAA
TTAGTCTCAC AGGTTGTAGT GCTTTTACCT AGCCAATTTT TCATCGCTGT AATTTCCTTC
GGCTTAATGC TTTTTTATAG TTGGCAGTTA GCATTAGCGG TAATACTCAT CGGTGCATTG
ATGAGTTTAG CTACATTGCC GCTTTTACCA GTCCTGCAAC AAAAAACTCG TAGTCTTTTA
GTTTTAGGTT CAGAAAATCA AGGTGTATTA GTAGAAACTT TTAAAGGCGC ACAAGTCCTG
AAAACCACAA ATGCTGCACC ACAATTTTGG GATGAATTAC AAAATCGTTT TGGTCGTCTG
GCAAATTTAA CATTTAGTAC TATTCAAATT GGCATTATCA ACAATACTAT TGCAAAATTC
CTTTCTGCTA TCGGCGGTGT AGTTTTATTA GGACTAGGAA GTATTTTAGT TATCCAAGGA
AAGTTAAGTA TTGGTCAAAT GTTAGCGATT AATGTACTAC AAGTTAATGT GCTGACATTA
ATTAGCTCAT TAGTAGGTTT AGTTGATGAA TATTTTCGTT CCCAAACTGC TATATCTCGG
CTTTTGGAAG TGATTGATGC TACTCCCGAA GTAGATAACA CTTCTCAAAA ACCATTCGCC
CAAATCTCTA GTGATGCAGA CATTCGTTTT TCCCATATTA ACTTTCACCA TCCTGGTAGA
GTTGACCTAT TAGAGGATTT TTCTCTCAAG CTACCAGGAG GACAAATTAT TGCTTTGATT
GGCAAGTCAG GCTGTGGTAA AAGTTCCTTA GCCAAACTCA TGGCAGGACT ATATCAGCCC
AATTCTGGTA ATATCCGCAT CGGCTTTTAT AATATTCAAG ATATTGCCCT TGATTGTTTG
CGGCAACAAG TAGTTTATGT ACCTCAAGAA CCTCATTTCT GGAGTCGTTC AATTTTAGAA
AACTTTCGTT TAGGAAGTCC CCATATTTCC TTTGAAGAAG TCGTCACAGC TTGCCAAATT
GCCGATGCTG ACAGTTTTAT TAGCCAACTA CCAAATAAGT ATCAAACAGT GCTAGGAGAA
TTTGGGGCTA ATCTTTCTGG AGGACAAAAA CAAAGACTAG CGATCGCCAG AGGTATTCTT
AATAATCCAC CAGTCCTAAT TTTAGATGAA GCAACAGCCG GACTAGACCC AGTTAGTGAA
ACTCAAGTTC TTGATCGGTT GCTAGAATCA CGACAGGGTA AAACCACAAT CCTCATTACC
CATCGTCCCA GCGTAGTCCA CCGCGCTGAT TGGATTGTAT TACTCGATCA AGGAAAAATA
CAACTGCAAG GTACTTTAGA AGATTTCCTG TCCCAACAAG GAGAGCATCT AAAGTTTTTA
TCACTGTAA
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| Protein sequence | MLNLFKLRKN YPCVLQLSEE DCGAACIVSI CRQHGRFLSM NKSREAVGTG QLGTTLLGLK
RGSENLGFNA RAVKASPAIL DRIKEIQLPA IIHWRGYHWV VLYGKKGSKY IIADPAVGIR
YIHREELTAA WNGVMLLMEP DHQRFSQQPH DKPQPGFTRF LQRILPYHGL LSQVFMINIV
LGVLALGSPV LIQILTDDVL VRGDTQLLAV IAIAVIIMNL FSSGMQVLES TMIAHFSQRL
QLGLVLEFGR RILQLPLTYY EARRSGEITS RLRDINEINQ LVSQVVVLLP SQFFIAVISF
GLMLFYSWQL ALAVILIGAL MSLATLPLLP VLQQKTRSLL VLGSENQGVL VETFKGAQVL
KTTNAAPQFW DELQNRFGRL ANLTFSTIQI GIINNTIAKF LSAIGGVVLL GLGSILVIQG
KLSIGQMLAI NVLQVNVLTL ISSLVGLVDE YFRSQTAISR LLEVIDATPE VDNTSQKPFA
QISSDADIRF SHINFHHPGR VDLLEDFSLK LPGGQIIALI GKSGCGKSSL AKLMAGLYQP
NSGNIRIGFY NIQDIALDCL RQQVVYVPQE PHFWSRSILE NFRLGSPHIS FEEVVTACQI
ADADSFISQL PNKYQTVLGE FGANLSGGQK QRLAIARGIL NNPPVLILDE ATAGLDPVSE
TQVLDRLLES RQGKTTILIT HRPSVVHRAD WIVLLDQGKI QLQGTLEDFL SQQGEHLKFL
SL
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