Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0609 |
Symbol | |
ID | 3678542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 765527 |
End bp | 766978 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715937 |
Product | neutral invertase |
Protein accession | YP_321128 |
Protein GI | 75906832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00065977 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.697444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGC TAAACGGACT GCTAACAAAT GACATTATAG AAGAATCAGC ATGGGAAGCT CTAGAAAAGT CAATTTTATA TTATAAAGGT CGTCCAGTAG GGACGGTTGC AGCCTTTGAT GCTTCTGTAG AAGCATTAAA TTACGACCAA TGTTTTGTGA GAGATTTTGT TTCATCAGCA TTAATTTTTT TGATTAAGGG TAAAACAGAT ATTGTCCGCA ACTTTCTAGA AGAAACATTA AAATTACAGC CTAAAGATAG ACAGTTAGAT GCTTATAAGC CGGGGCGGGG ATTAATTCCA GCCAGCTTTA AAGTAGTCTC AGATAATGGT GAAGAATATT TAGAAGCGGA TTTTGGTGAA CACGCGATCG CACGCGTTAC ACCAGTTGAT TCTTGTTTAT GGTGGATTCT TTTATTGCGT GCTTATGTAG TAGCCACCAA AGATTTTTCT CTAGCATATC AGCCAGAATT CCAAACAGGT ATTCGGCTAA TTATGGAAAT ATGCTTGGCA AATCGTTTTG ATATGTATCC AACATTATTG GTTCCTGATG GTGCCTGCAT GATTGACCGC CGATTAGGTA TTTATGGTCA TCCTTTGGAA CTACAAGTTT TATTTTATGC GGCGTTACGT GCAGCCCGTG AAATGTTAAT TTGTCAAGGA AATCAAGATG TTGTGGAAGC AATTGATAAC CGCCTACCGC TTTTGTGCGC CCACATCCGC CAACATTATT GGATAGATAT TAATCGCTTA AATGCAATTT ATCGCTTCAA GAGTGAAGAA TACGGTAAAG CAGCCGTCAA CTTATTTAAC ATTTATGTAG ACTCTATTCC CTATTACGAA TTAGATAAAT GGTTGCCTAA AAAAGGTGGT TATTTAGCTG GTAATGTTGG CCCTTCCCAG TTGGATACTC GCTTTTTTGC CCTGGGTAAT TTGATGGCGA TTATTTCTGA CTTAGCCACA GAGGAACAGT CACAAGCTAT TATGACTCTC ATCGAAGATA GATGGGAAGA TTTGGTAGGA GATATGCCAA TGAAAATCTG CTACCCAGCT TTAGAAGATG AAGAATATAG AATTGTCACA GGGTGCGACC CGAAAAATAT ACCTTGGTCG TATCATAATG CAGGAAGTTG GCCAGTTTTG ATGTGGATGC TAGCAGCAGC ATCTGTAAAA GCTGGGAAAC CTTATATAGC AGGTAAAGCC ATTGAAATTG CTCAAGCACG CCTTTTAGAA GATGAGTGGC CAGAGTATTA CGATGGCAAA AAAGGACGAC TCATCGGTAA ACAAGCCAGA AAATATCAAA CCTGGACAAT AGCTGGCTTT TTATTAGCGG CGGAATTGAT GGAAAATCCT TCTCATTTAT CATTAATTAG CTTTGATAAA CTACCATCAG AATTGGTTTC CAGGGCGTGT GAGTTTGAAA TTGGCAGTGT AGATACTTCT ATCTCTCTAT AA
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Protein sequence | MQKLNGLLTN DIIEESAWEA LEKSILYYKG RPVGTVAAFD ASVEALNYDQ CFVRDFVSSA LIFLIKGKTD IVRNFLEETL KLQPKDRQLD AYKPGRGLIP ASFKVVSDNG EEYLEADFGE HAIARVTPVD SCLWWILLLR AYVVATKDFS LAYQPEFQTG IRLIMEICLA NRFDMYPTLL VPDGACMIDR RLGIYGHPLE LQVLFYAALR AAREMLICQG NQDVVEAIDN RLPLLCAHIR QHYWIDINRL NAIYRFKSEE YGKAAVNLFN IYVDSIPYYE LDKWLPKKGG YLAGNVGPSQ LDTRFFALGN LMAIISDLAT EEQSQAIMTL IEDRWEDLVG DMPMKICYPA LEDEEYRIVT GCDPKNIPWS YHNAGSWPVL MWMLAAASVK AGKPYIAGKA IEIAQARLLE DEWPEYYDGK KGRLIGKQAR KYQTWTIAGF LLAAELMENP SHLSLISFDK LPSELVSRAC EFEIGSVDTS ISL
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