Gene Ava_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0609 
Symbol 
ID3678542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp765527 
End bp766978 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content39% 
IMG OID637715937 
Productneutral invertase 
Protein accessionYP_321128 
Protein GI75906832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00065977 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.697444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGC TAAACGGACT GCTAACAAAT GACATTATAG AAGAATCAGC ATGGGAAGCT 
CTAGAAAAGT CAATTTTATA TTATAAAGGT CGTCCAGTAG GGACGGTTGC AGCCTTTGAT
GCTTCTGTAG AAGCATTAAA TTACGACCAA TGTTTTGTGA GAGATTTTGT TTCATCAGCA
TTAATTTTTT TGATTAAGGG TAAAACAGAT ATTGTCCGCA ACTTTCTAGA AGAAACATTA
AAATTACAGC CTAAAGATAG ACAGTTAGAT GCTTATAAGC CGGGGCGGGG ATTAATTCCA
GCCAGCTTTA AAGTAGTCTC AGATAATGGT GAAGAATATT TAGAAGCGGA TTTTGGTGAA
CACGCGATCG CACGCGTTAC ACCAGTTGAT TCTTGTTTAT GGTGGATTCT TTTATTGCGT
GCTTATGTAG TAGCCACCAA AGATTTTTCT CTAGCATATC AGCCAGAATT CCAAACAGGT
ATTCGGCTAA TTATGGAAAT ATGCTTGGCA AATCGTTTTG ATATGTATCC AACATTATTG
GTTCCTGATG GTGCCTGCAT GATTGACCGC CGATTAGGTA TTTATGGTCA TCCTTTGGAA
CTACAAGTTT TATTTTATGC GGCGTTACGT GCAGCCCGTG AAATGTTAAT TTGTCAAGGA
AATCAAGATG TTGTGGAAGC AATTGATAAC CGCCTACCGC TTTTGTGCGC CCACATCCGC
CAACATTATT GGATAGATAT TAATCGCTTA AATGCAATTT ATCGCTTCAA GAGTGAAGAA
TACGGTAAAG CAGCCGTCAA CTTATTTAAC ATTTATGTAG ACTCTATTCC CTATTACGAA
TTAGATAAAT GGTTGCCTAA AAAAGGTGGT TATTTAGCTG GTAATGTTGG CCCTTCCCAG
TTGGATACTC GCTTTTTTGC CCTGGGTAAT TTGATGGCGA TTATTTCTGA CTTAGCCACA
GAGGAACAGT CACAAGCTAT TATGACTCTC ATCGAAGATA GATGGGAAGA TTTGGTAGGA
GATATGCCAA TGAAAATCTG CTACCCAGCT TTAGAAGATG AAGAATATAG AATTGTCACA
GGGTGCGACC CGAAAAATAT ACCTTGGTCG TATCATAATG CAGGAAGTTG GCCAGTTTTG
ATGTGGATGC TAGCAGCAGC ATCTGTAAAA GCTGGGAAAC CTTATATAGC AGGTAAAGCC
ATTGAAATTG CTCAAGCACG CCTTTTAGAA GATGAGTGGC CAGAGTATTA CGATGGCAAA
AAAGGACGAC TCATCGGTAA ACAAGCCAGA AAATATCAAA CCTGGACAAT AGCTGGCTTT
TTATTAGCGG CGGAATTGAT GGAAAATCCT TCTCATTTAT CATTAATTAG CTTTGATAAA
CTACCATCAG AATTGGTTTC CAGGGCGTGT GAGTTTGAAA TTGGCAGTGT AGATACTTCT
ATCTCTCTAT AA
 
Protein sequence
MQKLNGLLTN DIIEESAWEA LEKSILYYKG RPVGTVAAFD ASVEALNYDQ CFVRDFVSSA 
LIFLIKGKTD IVRNFLEETL KLQPKDRQLD AYKPGRGLIP ASFKVVSDNG EEYLEADFGE
HAIARVTPVD SCLWWILLLR AYVVATKDFS LAYQPEFQTG IRLIMEICLA NRFDMYPTLL
VPDGACMIDR RLGIYGHPLE LQVLFYAALR AAREMLICQG NQDVVEAIDN RLPLLCAHIR
QHYWIDINRL NAIYRFKSEE YGKAAVNLFN IYVDSIPYYE LDKWLPKKGG YLAGNVGPSQ
LDTRFFALGN LMAIISDLAT EEQSQAIMTL IEDRWEDLVG DMPMKICYPA LEDEEYRIVT
GCDPKNIPWS YHNAGSWPVL MWMLAAASVK AGKPYIAGKA IEIAQARLLE DEWPEYYDGK
KGRLIGKQAR KYQTWTIAGF LLAAELMENP SHLSLISFDK LPSELVSRAC EFEIGSVDTS
ISL