| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0601 |
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| Symbol | |
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| ID | 3678534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 756733 |
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| End bp | 757953 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715929 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_321120 |
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| Protein GI | 75906824 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.986761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.63228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAATT CAAAGCTCGA CCGTTCAATT TCTCCTCAAT CGATTTTACG TCCAGCGATT
TTTTTAGCTT GTTTTGCATC GTTTGTTGCC ATAGGAATCA GTTTTTATAT AGGTTTAAAT
TTTCGGGAAG CATCTAACCA AAAGGTACAA GCACCGGGGG CATTGTTACC AGAGCTAAAA
ACGGTTACAG CTTTAGGACG AATTGAACCA AAGGGGAAAG TGATTAAACT CTCGGCGACT
ACATCCAGTG AAGGTAGTCG GGTAGAACAA TTGTTAGTCA AAGAGGGGGA TAGGGTAAAA
CCGGGACAAT TAATTGCGAT TTTAGATAGC CGCGATCGCT TAGAAGCGGC TTTAAAAGAA
GCCCAAGAAC AAGTAAAAGT AGCCCAAGCC AACCTTAACC GTACCCAAGC TGGAGCGAAA
GGCGGAGAAA TTGCGGCACA ACAAGCCACA ATTGCCAAGT TAGAGGCGGA AGGTAGAGGT
AATATTGCGG CACAACTAGC TACTGTAGCG CGATTGCAAG CCGAAGTCAA AAACGCCACA
GCCGAAAACC AACGCTATCA AGCACTGTAT CAACAAGGAG CCGTTTCCGC GTCTGAAGGC
GATCGCAAGC GCTTAAACTT AGAAACTGCC CAAAAAACCC TCCAAGAAGC CCAAGCGGAC
TTGCAGCGCA TCCAAACCAC CAGCCAACAA CAACTGCAAC AAGCCAAAGC CACGTTAACA
CAAATCACCG AAGTTCGTGG CGTAGATGTA GAAGCTGCTA AAGCCGAAGT TAATCGCGCC
ATAGCCGCCG TGAACCAAGC AAAAGTGCAT TTACAACAAG CCTACGTGCG ATGGCCAAAA
GAGTTGGGAG GGTCATCACC TCAAGATGCT CAAGTGTTTG AGATTCACAC CCATCCAGGG
GAATTAGTCT CAACTGATGG CATTGTTGAT ATTGGACAAA CAAACCAAAT GTACGTAGTC
GCCGAAGTCT ACGAAAGTGA TATTAGCCGA GTCAAACCAG GACAAAAAGT AAGAATTATC
GGTGATTACT TACCTGTAGA AATGCAGGGA ACCGTCGAAC GCAAAGGCTT ACAGATACGG
CGGCAAAATG TAGTCAACAC TGACCCTGCG AGCAACATTG ATAACCGAGT AGTAGAAGTC
CACATTCGTT TAGATCCTAC TTCTAGCCAA AAAGCTGCTG ATTTAACAAA TATGCAGATT
AAAGCGGTCA TTGAACTGTG A
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| Protein sequence | MQNSKLDRSI SPQSILRPAI FLACFASFVA IGISFYIGLN FREASNQKVQ APGALLPELK
TVTALGRIEP KGKVIKLSAT TSSEGSRVEQ LLVKEGDRVK PGQLIAILDS RDRLEAALKE
AQEQVKVAQA NLNRTQAGAK GGEIAAQQAT IAKLEAEGRG NIAAQLATVA RLQAEVKNAT
AENQRYQALY QQGAVSASEG DRKRLNLETA QKTLQEAQAD LQRIQTTSQQ QLQQAKATLT
QITEVRGVDV EAAKAEVNRA IAAVNQAKVH LQQAYVRWPK ELGGSSPQDA QVFEIHTHPG
ELVSTDGIVD IGQTNQMYVV AEVYESDISR VKPGQKVRII GDYLPVEMQG TVERKGLQIR
RQNVVNTDPA SNIDNRVVEV HIRLDPTSSQ KAADLTNMQI KAVIEL
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