Gene Ava_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0583 
Symbol 
ID3678613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp735883 
End bp739050 
Gene Length3168 bp 
Protein Length1055 aa 
Translation table11 
GC content44% 
IMG OID637715911 
Productputative Ig 
Protein accessionYP_321102 
Protein GI75906806 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA CCGCGCCTCT ACTGAACAAT ACAGGTAATC TCACCTTATC TTTTATTACT 
GAAGATATTC CTGTTACTAG TAACACTGGT ACTCTAGTGT CTGAAATCAT CGGTAACTCT
ATAAGTGACC CAGATGCTAG TGCGCTAAAA GGCATTGCCG TTACCTTCGT TGATAACAGT
AACGGTGTTT GGGAATATAC CTTGAATAAT GGAACTAGTT GGAATGCCTT TGGAACACCA
TTGCTAAATG CAGCACGGTT ACTACCATCA AATGCAAATA CTAAAATCCG CTTTCGCCCC
AATGCTAACT TTAGTGGCTC TGCTGATATT AACTTTTACG CTTGGGATCA AACAACAGGT
ACATCAGGTA ACACAGCGAA TATTTTGGCT GGTAAAGGTG GAACAACTGC CTTCAGTACG
GACTATGAAG GAGCCTCCAT TACTGTTACC TCTGTTAACG ACACAGCACC AACCCTCAAC
GCCGGGACTC TCACTCTAGC AACTATTAAT GAGGATACAC CTCTTGTGAG TAACCGGGGT
AGTTTACTTG CTGACCTAGT GAGAGGATTA ATTAGCGATA GCGACGCAAA CCCCCAAGGA
ATTGCTGTCA CAGGAGCAGA TAATAGCAAC GGTAGTTGGC AATATTCTCT TGATGGCGGT
GCTAATTGGC TCAACTTTGG TGCTGTTTCT GATAGCTCAG CTACAGTACT ACTTCCTAGT
ATCAGACTCT ATGATGGTTC ATTGATTGGC TCACCAACTT CTCAAGGCTG GCTCAAATTT
GGTGCTTCGC CTGCTATTAC TCTTCCTATA CTAGGAAATG TGCTTGGGGT TGGTGGTACT
CAGTCTCAGA TTAGTGGTGG AACTCAATTA AATAGTAATA CTACACCTGC TTCATCACTA
GCTGGATTTA CAGCCTCAAC TGGGACATCC GGTTACAGTA ATTACAATGG TTACGCCCCA
GTTCTATTTA ACCAGTCGTT TCCTGCACTT GACCCCGTAA AAGGCTTCAC TATTAGTTTT
GATGTGAAAA TTAACAGTGA AACCCACACC AGTGATGATA ATGGTGATGG CATTCAAGAC
CGCGCTGGCT TTAGCGTCAT TGTTGTTACT AGTGACAAAA CCAAAGCAAT TGAGTTAGGT
TTCTGGACAG ATGAAATTTG GGCGCAGAAT GCTAGCCCGT TATTTACCCA CAGCACCACA
GAACGGGCAT TTAGAAACAC AAGCACAGCA GTTACCCACT ATAATTTGGT AGTTGAAAAT
AATACTTACA AGCTGTTTGC GCCGGATTCA TCTACGCCGA TTTTAAGTGG CAATCTCCGC
GATTACACGG CATTCAACCA CACCACTGCT GCACCTTCCC CAATCAATTC TTTACCTTTT
GACCCTTACG AAACACCCAA TTTCCTTTTC CTCGGTGACA ATACAACCTC CGCTAGGTCT
TCTATTGACC TCACACGGGT GGAACTGCAA ACAAATACGA GAGTTCGCTT TGTCCCCAAT
GCTGACTATA ATGGCCAAGC TAATCTCACC TTCCGCGCCT GGGATGGTTC TAATGGTGTA
GCCAGTGGTA CTACAGGAGT AAACGCTTCA GTTAATGGCA ATGCCACAGC TTTTAGTAGC
AATACTCAGA CTGTCGGTAT CACTATTAAT TCTGTTAATG ATGCACCGAT AGTAGCCAAT
AGTATTTCTA ACCAAACAGC TATAACAGGC ACAGCATTTA ACTTTCAAAT CGCCGCTAAC
ACATTTGCTG ATGCAGACTC AGGCGACACC CTCACGTATT CAGCTACCCG CAGCGATGGT
AGCCCTCTAC CCAGTTGGTT ATCTTTTGAT GCCGATACGG GCAGATTTAC TGGTACTCCT
ACCACGGATA ATTTAGGTAG CATTAGCCTG AGAGTTACTG CTACAGATAC AACCAACCTC
AGTGTTAACA CTATATTTAA CCTAGAAATC AGACGGCCAG ACAATATCAT CAACGGCACC
GCCAACAATA ATACAATCAT AGCTACCAGT GCCAAAGATA TATTTGATGG TGGAGATGGA
GGTGATATCT TCATTACCAA CATCGCCAAC CTCAGCCAAA ATGACATTCT CAATGGTGGA
AATGGACAAG ACACAATCAT TATTCAAGGT GGCATAAATA CGGACACCAT CAGCTTTGAC
TTAAGTAATG TCAACAATCA ACTAGCCAGC ATTCTTGGCA CAACCATCAC CAATGTTGAA
ACCTTTGACC TGAGAAGCTT TGCCGGCACA GTCACTTTTA CAGGTGGTAG TGGCAACGAT
GTAGTCTATG GTGGCGTTGG TAACGATACC CTGACTGGTG GCGCTGGTGA TGATAACCTC
AATGGAGGTG CTGGTGATGA TACCCTCATC GGTGGTGATG GTAATGATAT CCTCACAGGT
GGTAGTGGTA CAAACACCCT GACTGGTGGT GCAGGTAATG ACCGTTACTA CATAGATAAC
GCCAGCGATG TTATTCAAGA GGGGGCGGGT GCTGGTCAAG ATGAGGTTTT TGCCACAGTC
AGCTACACCT TAGCTGCTAA TGTCGAGGCT CTGACCCTCA GAGGTACTGC CATACAAGGT
ACGGGCAATA GCAGTAACAA TAACATTAGA GGTAATAATG CTAACAACAT TCTGTCTGGT
GAAGATGGCA ATGACAATCT TACAGGTAAT GCTGGCAATG ATGTATTGAT TGGTGGTCGT
GGTAATGATA CCCTCAATGG CGGTATTGGC AATGATGAGT TGATTGGTGG CGCTGGTAGC
GATCGCTTAT TCGGTGGTGC TGGTGCTGAT TACTTCAGTT TTGGTAGTCA GGGTAATCCC
TTCAACAGTG GTGATTTTGG CATAGATACC ATTGCTGATT TTGCAGTTGG CGTGGATGAC
ATTAAGTTAG ATAAGGTCAG CTTCTCTGCT CTAACTAGTG TGGTTGGCAA TGGTTTTAGT
GTAAGTAGTG AGTTTGCTAG TGTAAGTAAC GATACCTTAG CGGCAACTAG CAATGGGTTG
ATTGTTTACA GTTTAGGTAG TGGTCGCTTG TTCTATAACC AAAATGGCAG CGCTGCTGGT
TTTGGCACAG GCGCGCAGTT TGCGACTCTC TCCGGTACTC CTATTCTGAG TGCTGATGAT
TTCTTCATTT TCCAGTCTGT TCAGGAACCT GCTAAAAAAA TAGCGTAA
 
Protein sequence
MANTAPLLNN TGNLTLSFIT EDIPVTSNTG TLVSEIIGNS ISDPDASALK GIAVTFVDNS 
NGVWEYTLNN GTSWNAFGTP LLNAARLLPS NANTKIRFRP NANFSGSADI NFYAWDQTTG
TSGNTANILA GKGGTTAFST DYEGASITVT SVNDTAPTLN AGTLTLATIN EDTPLVSNRG
SLLADLVRGL ISDSDANPQG IAVTGADNSN GSWQYSLDGG ANWLNFGAVS DSSATVLLPS
IRLYDGSLIG SPTSQGWLKF GASPAITLPI LGNVLGVGGT QSQISGGTQL NSNTTPASSL
AGFTASTGTS GYSNYNGYAP VLFNQSFPAL DPVKGFTISF DVKINSETHT SDDNGDGIQD
RAGFSVIVVT SDKTKAIELG FWTDEIWAQN ASPLFTHSTT ERAFRNTSTA VTHYNLVVEN
NTYKLFAPDS STPILSGNLR DYTAFNHTTA APSPINSLPF DPYETPNFLF LGDNTTSARS
SIDLTRVELQ TNTRVRFVPN ADYNGQANLT FRAWDGSNGV ASGTTGVNAS VNGNATAFSS
NTQTVGITIN SVNDAPIVAN SISNQTAITG TAFNFQIAAN TFADADSGDT LTYSATRSDG
SPLPSWLSFD ADTGRFTGTP TTDNLGSISL RVTATDTTNL SVNTIFNLEI RRPDNIINGT
ANNNTIIATS AKDIFDGGDG GDIFITNIAN LSQNDILNGG NGQDTIIIQG GINTDTISFD
LSNVNNQLAS ILGTTITNVE TFDLRSFAGT VTFTGGSGND VVYGGVGNDT LTGGAGDDNL
NGGAGDDTLI GGDGNDILTG GSGTNTLTGG AGNDRYYIDN ASDVIQEGAG AGQDEVFATV
SYTLAANVEA LTLRGTAIQG TGNSSNNNIR GNNANNILSG EDGNDNLTGN AGNDVLIGGR
GNDTLNGGIG NDELIGGAGS DRLFGGAGAD YFSFGSQGNP FNSGDFGIDT IADFAVGVDD
IKLDKVSFSA LTSVVGNGFS VSSEFASVSN DTLAATSNGL IVYSLGSGRL FYNQNGSAAG
FGTGAQFATL SGTPILSADD FFIFQSVQEP AKKIA