Gene Ava_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0570 
Symbol 
ID3682264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp715576 
End bp717441 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content28% 
IMG OID637715898 
Producthypothetical protein 
Protein accessionYP_321089 
Protein GI75906793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.407962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.128274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACC CAGTAATAAA TAGTTTCGTT CAACAATACC TAACAGAATA TGAAATAGAA 
TCAGAGGGTG AATACACAGA TTTTGAGTTA TTCGCTAATT ATTGTGTGTT TTCATCTTTC
AATCGTAGAA CAGAAGACTT TGATGTCACT AAAGTCCACA CAGGACAAAC TAAAGACACA
GGATTAGATG GTATAGGTAT TTTTATTGAT GATGTTTTAG TTAATTCTGA AGAAGATGCA
GAACAGATTA TTGGCGATAA CAAGAATAGA ACTTTGAAAT TAAAATTCAT TTTTGTTCAA
GCAAAACTAA AAAATAGCTT TGAATTTGAA GTTGTTAAAA AAACTATTGA TGCAGTACAA
GATTTCTTTG CTGATTATAG GGATATACAA CCTATATATT CAAGAAGTGA GCAGGTTAAA
GAAAAAGCTG CTCTAGCATC TTATTTACTT AAAAAGTATA TTATAAATAC ACGAGACAAG
AAACCAGAGT GTCATATATA CTATATTTGT ATTTCTCATA AAGATGCTGA TTCTACAATT
AAACTTAAAC AAGCAAGACT TGTTAAAGAA CTAGAAGAAA AATTAAGGTT TTTGTCAGGA
ATTAATTTTT ACCTATGGGG ATCTGACAAA ATTGAAAAAC TATATAGACA AACCAAGCGT
CAAGTCGAAG CTACAATTAG AGTCAGTAAG TATTTTACTT TAAAAGTTCC AGGAGTAAAA
AGAGCTTATA TAACAGCAGT ATCTTTTGAA CAGTTTAAAA ATATAATTTT GGATGAAGAT
AAAAATATTA GAGATGTTAT TTTTTATGAT AATATTAGAG GTTTTTTAGG AGTAGGAGAA
GATAATTCAA TAAATGAAGC CATAAAAGAA ACTCTAAAAT CAACAGAAGA AGTAAATCTT
TTCCCACTGC TAAATAATGG AATAACAATT ATTACGCACA ATTTAAATAT CATAGATGAT
GATAAATACC AATTAATTGA TTATCAGGTT GTTAATGGTT GTCAAACCAG TCATGTTTTA
GATATGTGTA AAGACTTTCC TAACATAGAT GATATAATAA TACCTGTTAG AATCATTGAA
ACAGATGATG ACAATATCAG AAATAAAATA ATAAAAGCAA CAAATTCCCA AACAGAAGTT
AAAAAAGAAT TACTTGCAGC TTTATCTGAT TTTAATAAAA AATTAGAAGA ATGTTATGAA
AGTCAAGAAC CGAGACATAG TAAATATCTT TACTATGAAA GAAGACCAGG ACAGTTTTTT
AATCAAAGCG TTATTAAAAC TAGGATTATT AAGATCCAAC CTCAGATCAA AAGTTTTACC
GCAATGTTTT TAGATGAGCC TCATAAAGTC AAATATTTTG ATCAAAAGTT AATTGATAGA
ATTGGAAGTG ATATTTTTCA CAAGGATCAT TATCCAATAG CATATTACAC AAGTTCATGG
GCGTTTTATC AGTTGAACTC TCTGTATAAA AAACCATCAT TTAATAGAAA TTATAATAAG
AAAGATACCT CAACAGTGGT TAAGTATTAT TTGTTAATGA TTTTTAAATA TCTTGCTATT
CCTGGTGATT GTGTAAGTTG TAAAAACAAA AAAGAAATTG AAAGATATTG TAATGAATTA
CTTCGTATTC TTGATAAAAC TGAAGAATCA GAAAAAATCT TTGTTGAAGC TAATAATAAA
TTAATTAGTT TTGCTCAAAA ATACAGTCAG CAAAATTTTA AATCTATCTC ACCAGACTAC
GAAAAAATCT GTAAACAAGA ATCTTGGACT GATTTTATTT TGACAGAAAT GGGAATCACA
AATAAAAATC TTTCAAAAGA GAGGCAAAAA GCAATAACGG ATAAACAAGG AACTCTTCCT
TTGTAA
 
Protein sequence
MIDPVINSFV QQYLTEYEIE SEGEYTDFEL FANYCVFSSF NRRTEDFDVT KVHTGQTKDT 
GLDGIGIFID DVLVNSEEDA EQIIGDNKNR TLKLKFIFVQ AKLKNSFEFE VVKKTIDAVQ
DFFADYRDIQ PIYSRSEQVK EKAALASYLL KKYIINTRDK KPECHIYYIC ISHKDADSTI
KLKQARLVKE LEEKLRFLSG INFYLWGSDK IEKLYRQTKR QVEATIRVSK YFTLKVPGVK
RAYITAVSFE QFKNIILDED KNIRDVIFYD NIRGFLGVGE DNSINEAIKE TLKSTEEVNL
FPLLNNGITI ITHNLNIIDD DKYQLIDYQV VNGCQTSHVL DMCKDFPNID DIIIPVRIIE
TDDDNIRNKI IKATNSQTEV KKELLAALSD FNKKLEECYE SQEPRHSKYL YYERRPGQFF
NQSVIKTRII KIQPQIKSFT AMFLDEPHKV KYFDQKLIDR IGSDIFHKDH YPIAYYTSSW
AFYQLNSLYK KPSFNRNYNK KDTSTVVKYY LLMIFKYLAI PGDCVSCKNK KEIERYCNEL
LRILDKTEES EKIFVEANNK LISFAQKYSQ QNFKSISPDY EKICKQESWT DFILTEMGIT
NKNLSKERQK AITDKQGTLP L