Gene Ava_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0569 
Symbol 
ID3682263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp712881 
End bp715511 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content48% 
IMG OID637715897 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_321088 
Protein GI75906792 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.468126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.143422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAT CATACCGTCA ACACGTTGCC GAAAGAGCAG CACTAGGCAT TCCGCCCTTA 
CCGTTGGATG CAAAACAAAC TTCAGAATTA TGTGAATTGC TGAAGAATCC ACCAAAGGGT
GAAGAAGATA CATTATTACA TTTATTGCGC GATCGCGTTT CCCCTGGTGT TGATCCGGCG
GCTTACGTCA AAGCTGGATT TCTCACCGCC ATTGCCAAAC AAGAAGTCAA AAGTCCCATC
ATTTCGTCCA TAGACGCGGT GCAGTTGTTG GGAACAATGG TAGGCGGCTA TAATGTGCAA
TCCTTAATCG AGTTGCTGCA ATTCGCCACA GTATCCGTCT CTGACTCTTC CGAAACACCC
TTAGTTATGG GTGGAGAAGG CAAAGAACCC ATAGCAGCCT ACGCCGCCGC CGCCCTCAGC
AAAACCTTGC TGGTGTATGA TGCTTTTCAC GATATTGTGG AACTAGCAAA AACCAACCCC
TACGCTAAAC GGGTAGTTGA TTCTTGGGCA GCAGCCGAGT GGTTTACATC TCGCCCCCAA
CTGCCAGAAT ATATTAACGT CACAGTCTTT AAAGTACCAG GGGAAACCAA CACCGACGAT
TTATCCCCCG CTACCCACGC CACCACTCGC CCAGATATTC CCTTACACGC CCTAGCAATG
CTAGAGTCAA GGCAACCTGG AAGCTTAGAA ACTATTACTG AATTGAAGAA AAAAGGACAT
CCCGTTGCTT ACGTCGGCGA TGTAGTCGGT ACTGGTTCTT CTCGCAAATC GGCGATTAAC
TCAGTTTTGT GGCATACAGG CGAAGATATT CCATTTGTAC CCAACAAACG CGCTGGGGGG
TATATTTTAG GTGGGGCGAT CGCTCCCATC TTTTTCAACA CTGCTGAAGA TGCCGGTGCT
TTGCCTATCC AGTGCGATGT CACCAAGTTA GAAACTGGTA TGGTGATTAC CATCTATCCC
TACAAAGGCG AAATCACCAA CGAAGACGGC GAAGTTATTT CTACCTTCAC CCTCAAACCA
GACACCATCC TCGATGAAGT CCGCGCCGGT GGACGCATCC CCCTACTAAT CGGCCGTACC
CTCACCGACA AAACCCGTCA AGCCCTTGGT TTAGAACCCA GCACTTTATT TATCCGTCCC
CAGCCACCAG CAGACACAGG TAAAGGCTAC ACCCTAGCCC AGAAAATGGT AGGTAAAGCC
TGCGGTTTAC CAGGTGTCCG TCCCGGTACA TCTTGCGAAC CCATCATGAC TACCGTTGGT
TCCCAGGATA CCACCGGCCC CATGACCCGC GACGAATTAA AAGAACTGGC TTGTTTAGGT
TTCAGTGCTG ATTTAGTCCT GCAAACCTTC TGTCATACCG CCGCCTATCC CAAACCCGTA
GACATCAAAA CTCACCACGA ACTACCAGAT TTCTTCTCTT CCCGCGCGGG TGTCGCCTTA
CGTCCCGGTG ATGGTATCAT TCACTCTTGG CTCAACCGGA TGCTGTTACC CGACACCGTC
GGTACAGGTG GCGACTCTCA TACCCGCTTC CCCTTGGGTA TTTCCTTCCC CGCAGGTTCC
GGGTTAGTCG CCTTTGCTGG TGCGTTGGGT GTGATGCCCT TGGATATGCC AGAATCAGTT
TTGGTACGAT TCAAAGGCGA ATTGCAACCA GGAATTACCT TGCGAGATAT TGTCAACGCC
ATTCCCTACG TCGCCATTCA ACAAGGTTTA CTCACAGTCG AGAAGGAGAA CAAGAAAAAT
ATCTTCTCTG GACGCATCAT GGAAATTGAA GGCTTACCAG ACTTAAAAGT CGAACAAGCC
TTTGAACTTA CCGATGCTAC CGCCGAACGT TCTTGCGCCG GTTCCACCAT TAAACTGAGT
GTTGAAACAG TCGCCGAATA TCTGCGTTCC AACGTAGCCT TACTGAAGAA CATGATTGCA
CGGGGTTATC AAGACTCCCG CACCCTCCTA CGCCGTATCG CCAAAATGGA AGAATGGTTA
GCCAACCCAG TGTTATTAGA AGGCGATGCA GATGCGGAAT ATGCAGCCAT AATTGAAATT
GATTTAAACG ACATCAAAGA ACCAATTGTC GCTGCTCCCA ACGACCCCGA TAATGTTAAG
TTATTATCAG AAGTTGCTAA TGACCCAGTA CAAGAAGTAT TCCTTGGTTC TTGTATGACA
AACATTGGTC ATTATCGCGC CACAGCCAAA GTTTTGGAAG GTGCAGGAGA AGTCAAAACT
CGCCTGTGGA TAGCACCACC AACCCGCATG GATGAACACC AATTAAAAGA GGAAGGTGTA
TACAGCATTT TTGGTGCGGC TGGTGCAAGA ACAGAAATGC CTGGATGCAG TTTATGTATG
GGAAATCAGG CGCGAGTTGC TGACGGAACC ACAGTATTTT CTACCTCTAC CCGCAACTTT
AATAACCGCA TGGGTAAAGG TGCGCGAGTG TATTTAGGTT CTGCTGAATT AGCAGCAGTT
TGCGCGTTAT TAGGTCGCAT CCCCACAGTA CAAGAATATC TTGATATTGT GGCAAGTAAG
ATTCATCCTT TTGCTGATAA CTTATATCGG TATTTGAACT TTGATCAAAT AGTCGGTTTT
GAGGATGAAG GGCGGGTGAT TTCTAAGGAG GAGCAAGCTT TGTTGCTATA G
 
Protein sequence
MLESYRQHVA ERAALGIPPL PLDAKQTSEL CELLKNPPKG EEDTLLHLLR DRVSPGVDPA 
AYVKAGFLTA IAKQEVKSPI ISSIDAVQLL GTMVGGYNVQ SLIELLQFAT VSVSDSSETP
LVMGGEGKEP IAAYAAAALS KTLLVYDAFH DIVELAKTNP YAKRVVDSWA AAEWFTSRPQ
LPEYINVTVF KVPGETNTDD LSPATHATTR PDIPLHALAM LESRQPGSLE TITELKKKGH
PVAYVGDVVG TGSSRKSAIN SVLWHTGEDI PFVPNKRAGG YILGGAIAPI FFNTAEDAGA
LPIQCDVTKL ETGMVITIYP YKGEITNEDG EVISTFTLKP DTILDEVRAG GRIPLLIGRT
LTDKTRQALG LEPSTLFIRP QPPADTGKGY TLAQKMVGKA CGLPGVRPGT SCEPIMTTVG
SQDTTGPMTR DELKELACLG FSADLVLQTF CHTAAYPKPV DIKTHHELPD FFSSRAGVAL
RPGDGIIHSW LNRMLLPDTV GTGGDSHTRF PLGISFPAGS GLVAFAGALG VMPLDMPESV
LVRFKGELQP GITLRDIVNA IPYVAIQQGL LTVEKENKKN IFSGRIMEIE GLPDLKVEQA
FELTDATAER SCAGSTIKLS VETVAEYLRS NVALLKNMIA RGYQDSRTLL RRIAKMEEWL
ANPVLLEGDA DAEYAAIIEI DLNDIKEPIV AAPNDPDNVK LLSEVANDPV QEVFLGSCMT
NIGHYRATAK VLEGAGEVKT RLWIAPPTRM DEHQLKEEGV YSIFGAAGAR TEMPGCSLCM
GNQARVADGT TVFSTSTRNF NNRMGKGARV YLGSAELAAV CALLGRIPTV QEYLDIVASK
IHPFADNLYR YLNFDQIVGF EDEGRVISKE EQALLL