Gene Ava_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0559 
Symbol 
ID3682331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp703978 
End bp704622 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content36% 
IMG OID637715887 
Producthypothetical protein 
Protein accessionYP_321078 
Protein GI75906782 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.450507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.102514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG AATTATTAGC CAGAGTATTG CAAGTCTTGA GTATAAATAT GCGTTGGATG 
ACTTGGAATT TATTTTTGGC TTTTATACCT TTGCTTTTGA GTGTTTGGCT GTTCCGCACC
AGAAGCGGAC GCTCTTGGCT ATGGTGGCTA GGATTTTTAG TTTTCTATGC TTTTTTACCT
AACGCACCTT ATTTATTAAC TGATGTAATT CATTTAATAC ACGATATTCG CACCATTGAA
TCGGTATGGA TGATTACCTT AGTACTAATT CCTGTTTATT TGCTGGTGAT CTTAGCAGGA
TTTGAAGCTT ATGTTATATC TTTAATCAAT TTAGGTTATT ATTTACACCG CATTGAGAAA
AGCGAATGGA TTTTAAAGGT TGAATTAATC ACTCATGCGT TGTGTGCGAT CGGCATTTAT
TGGGGTAGAT TTCTGCGATT TAATAGTTGG GATTTTATTA CTCAACCAGA TGCTGTATTG
ACTAGGGGTA TAGAAGAACT TTTAGGAAAG CAGCCTTTGA TTATTATTAC TGCTAGTTTT
GTGATCCTTT TAGTTTTGTA CTTAATAATG AAACGAGTAT CTTTAGGTTT TGTGATGCAG
CGAAATAATC CGATAGGGAG AAGATCGGGG CGTGCAGAAT ACTAA
 
Protein sequence
MKEELLARVL QVLSINMRWM TWNLFLAFIP LLLSVWLFRT RSGRSWLWWL GFLVFYAFLP 
NAPYLLTDVI HLIHDIRTIE SVWMITLVLI PVYLLVILAG FEAYVISLIN LGYYLHRIEK
SEWILKVELI THALCAIGIY WGRFLRFNSW DFITQPDAVL TRGIEELLGK QPLIIITASF
VILLVLYLIM KRVSLGFVMQ RNNPIGRRSG RAEY