Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0559 |
Symbol | |
ID | 3682331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 703978 |
End bp | 704622 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637715887 |
Product | hypothetical protein |
Protein accession | YP_321078 |
Protein GI | 75906782 |
COG category | [S] Function unknown |
COG ID | [COG4330] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.450507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.102514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAG AATTATTAGC CAGAGTATTG CAAGTCTTGA GTATAAATAT GCGTTGGATG ACTTGGAATT TATTTTTGGC TTTTATACCT TTGCTTTTGA GTGTTTGGCT GTTCCGCACC AGAAGCGGAC GCTCTTGGCT ATGGTGGCTA GGATTTTTAG TTTTCTATGC TTTTTTACCT AACGCACCTT ATTTATTAAC TGATGTAATT CATTTAATAC ACGATATTCG CACCATTGAA TCGGTATGGA TGATTACCTT AGTACTAATT CCTGTTTATT TGCTGGTGAT CTTAGCAGGA TTTGAAGCTT ATGTTATATC TTTAATCAAT TTAGGTTATT ATTTACACCG CATTGAGAAA AGCGAATGGA TTTTAAAGGT TGAATTAATC ACTCATGCGT TGTGTGCGAT CGGCATTTAT TGGGGTAGAT TTCTGCGATT TAATAGTTGG GATTTTATTA CTCAACCAGA TGCTGTATTG ACTAGGGGTA TAGAAGAACT TTTAGGAAAG CAGCCTTTGA TTATTATTAC TGCTAGTTTT GTGATCCTTT TAGTTTTGTA CTTAATAATG AAACGAGTAT CTTTAGGTTT TGTGATGCAG CGAAATAATC CGATAGGGAG AAGATCGGGG CGTGCAGAAT ACTAA
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Protein sequence | MKEELLARVL QVLSINMRWM TWNLFLAFIP LLLSVWLFRT RSGRSWLWWL GFLVFYAFLP NAPYLLTDVI HLIHDIRTIE SVWMITLVLI PVYLLVILAG FEAYVISLIN LGYYLHRIEK SEWILKVELI THALCAIGIY WGRFLRFNSW DFITQPDAVL TRGIEELLGK QPLIIITASF VILLVLYLIM KRVSLGFVMQ RNNPIGRRSG RAEY
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