| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0558 |
|---|
| Symbol | |
|---|
| ID | 3682330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 702876 |
|---|
| End bp | 703964 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637715886 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321077 |
|---|
| Protein GI | 75906781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0561744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0621069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTT CTTCATCCCT TCAAAGTTTA CTCATTTATG GTCTGAGCGG CCCGGTTATC
GCTCTGAATG TCTGGCTATT GTCCGTACTT TTTCGGTATT TTCAAAGCCC TTTTACAATT
CTGAGTCTGG CGGCGATTTT AGCTTTCTTA CTAAATTATC CAGTAAAATT TTTTGAACGG
GCGAGAATTA CCCGTACTCA AGCTGTTGTT ATTGTTCTGC TGGTCACCTT AACTTTATTC
GGCATTCTGG CAGTTACTTT AGTGCCGATG CTGATTGACC AAACAGTCCA ACTATTAAAT
AAGATTCCTG ATTGGTTAAC AGCTAGTCAA GCAAACTTAG AGCATTTTGA GAGATTTGCC
AAGCAGCGAC GTTTACCCCT TGATTTGCGG GTTGTGAGTA ATCAAATAAA CGCTAGCATT
CAAAGTGTAG TGCAGCAACT GGCTTCTGGT GCGGTGGGAT TAGCTGGAAC ATTGCTCTCA
GGATTACTCA ATTTTATATT AGTGGTAGTG CTGGCATTTT ATATGCTGAT ATATGGCGAT
CGCGTCTGGT ATGGTCTGAT GAATCTACTA CCATCTAAAA TCAGACTCCC TTTAACCAAA
TCTTTGCAGT TAAACTTCCA AAACTTTTTC CTCAGCCAGT TATTGCTGGG GTTATTCATG
ATTGTCGCGC TTACCCCGAT TTTCCTCATC CTCAAAGTAC CCTTTGCTTT GTTATTTGCC
ATACTCATTG GAATTTCCGA ACTTATTCCT TTTATTGGCG CAACTTTAGG TATTGGGTTA
GTAACAATTT TGGTACTTTT GCAAAACTGG TGGTTAGCAG TGCAAGTGGC GATCGCCGCA
ATTATCATGC AGCAGATCAA AGACAATCTC TTAGGCCCCA AGTTACTGGG TAACTTTATT
GGACTTAATC CTATTTGGAT TTTTGTAGCA ATTTTGATGG GATATGAAAT AGCAGGTTTA
TTAGGAACAC TAGTTGCTGT TCCTATTGCC GGCACCATTA AAGGAACTTT CGATACTCTT
AAGGGTGGCA AGTCAGATGA CTTTATGTCA ACAGTCACTA TTGACCATGA CTCACCTAAT
AATGAATAG
|
|---|
| Protein sequence | MRRSSSLQSL LIYGLSGPVI ALNVWLLSVL FRYFQSPFTI LSLAAILAFL LNYPVKFFER
ARITRTQAVV IVLLVTLTLF GILAVTLVPM LIDQTVQLLN KIPDWLTASQ ANLEHFERFA
KQRRLPLDLR VVSNQINASI QSVVQQLASG AVGLAGTLLS GLLNFILVVV LAFYMLIYGD
RVWYGLMNLL PSKIRLPLTK SLQLNFQNFF LSQLLLGLFM IVALTPIFLI LKVPFALLFA
ILIGISELIP FIGATLGIGL VTILVLLQNW WLAVQVAIAA IIMQQIKDNL LGPKLLGNFI
GLNPIWIFVA ILMGYEIAGL LGTLVAVPIA GTIKGTFDTL KGGKSDDFMS TVTIDHDSPN
NE
|
|---|
| |