Gene Ava_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0557 
Symbol 
ID3682329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp702208 
End bp702852 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID637715885 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_321076 
Protein GI75906780 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.365319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0595481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA CCATAGCTGA CCTCCGCAAG GATTATACCC TAGAGGCTTT AAGTGAAGTA 
GAAGTTGATA CTAATCCTTT CAGACAATTT AAAAGGTGGT TTGAGCAGGC TTTAGCAGCT 
CAACTTCCAG AACCCAATGC TATGACTATC GCTACAAGTA CACCAGATGG TCAACCTTCC 
GCGAGAATGG TACTGCTCAA AGACTTTGAT GAACGGGGTT TTGTCTTTTT TACCAACTAT 
AATAGTCGGA AAGGTCAAGA ACTAGCTGAA AATCCCCAAG CAGCTTTGGT CTTTTGGTGG 
GCAGAATTAG AACGCCAAGT CAGAATTTCA GGTAGGGTAG AGAAGGTTTC AGAAAGCGAA 
TCAGACTACT ACTTCTACAG TCGTCCTGCT AATAGCCGAC TGGGTGCATG GGTATCAAAT 
CAAAGCGAAA TCATCGCCAG TCGAGAAGTT CTAGAGCAAA GGATGCAGGA ATTTCAACAT 
AAATATGAAA ATCAGGAGAT TCCTAGACCT TCCCACTGGG GGGGTTTGCG AGTGATCCCC 
TCACAGATAG AGTTTTGGCA AGGACGCTCT AGCCGCCTAC ACGATCGCCT GCTTTATACT 
CTTTTAAATG ATGACAGTTG GGAAATTCAC CGATTATCTC CTTAA
 
Protein sequence
MDRTIADLRK DYTLEALSEV EVDTNPFRQF KRWFEQALAA QLPEPNAMTI ATSTPDGQPS 
ARMVLLKDFD ERGFVFFTNY NSRKGQELAE NPQAALVFWW AELERQVRIS GRVEKVSESE 
SDYYFYSRPA NSRLGAWVSN QSEIIASREV LEQRMQEFQH KYENQEIPRP SHWGGLRVIP 
SQIEFWQGRS SRLHDRLLYT LLNDDSWEIH RLSP