Gene Ava_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0550 
Symbol 
ID3682322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp695888 
End bp696511 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID637715878 
Productaromatic acid decarboxylase 
Protein accessionYP_321069 
Protein GI75906773 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.108672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAAC ATAACAAACC TCTGATTATC GGCGTATCAG GAGCATCTGG ACTGATTTAC 
GCCGTCCGCG CCCTTAAATA TCTGCTCACC GCCGACTATG AAATTGAATT AGTTGCCTCT
AAATCAACTT ACATGGTTTG GCAAGCAGAA CAGGAAACTC GGATGCCATC AGAACCAAAA
CAACAAGAGC AATTCTGGCG AGAACAAGCC GGGGTTGCTC TCTCTGGCAA ACTGCGTTGC
CATCCTTGGA GCGATGTAGG AGCCAATATC GCCAGTGGTT CCTTCCGCAC CTCAGGCATG
ATTGTGATTC CTTGTAGTAT GAGTACAGTA GCCAAGCTAG CGGGTGGTTT GAGTTCTGAC
TTACTAGAAC GGGCGGCTGA TGTGCATCTC AAAGAAGGAC GTAAATTAGT TATCGTTCCC
AGAGAAACCC CTTTTAGCTT GATTCACCTA CGCAACTTAA CCACCTTAGC TGAAACTGGA
GTCCGCATTG TCCCCGCCAT CCCTGCTTGG TATCACAACC CACAAACCAT TGAGGACTTA
GTTGATTTTG TTGTTGCTCG TACTCTAGAC CAACTTGATA TCGATTGCGT ACCTCTAAAA
CGATGGGAGG GAGGTAAAGT GTAA
 
Protein sequence
MSQHNKPLII GVSGASGLIY AVRALKYLLT ADYEIELVAS KSTYMVWQAE QETRMPSEPK 
QQEQFWREQA GVALSGKLRC HPWSDVGANI ASGSFRTSGM IVIPCSMSTV AKLAGGLSSD
LLERAADVHL KEGRKLVIVP RETPFSLIHL RNLTTLAETG VRIVPAIPAW YHNPQTIEDL
VDFVVARTLD QLDIDCVPLK RWEGGKV