Gene Ava_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0545 
Symbol 
ID3682317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp688254 
End bp690389 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content44% 
IMG OID637715873 
Producthypothetical protein 
Protein accessionYP_321064 
Protein GI75906768 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.322459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGA ATAAATTCAG TACTCATCAC TCATTCAAGC TAGACTGGGC AAATAAGGCA 
ACTACCACCA TCTGCATCAT GACTAATCGC CTTGCCCAAA CCAAGAGTCT CTACCTCCGC
AAACACGCCG AAAACCCGAT TGATTGGTGG CCTTGGTGTG ACGAAGCTCT TGCTACTGCT
AAATCACAAG ATAAACCAAT TTTTTTGTCG ATTGGTTACT CCAGTTGTCA CTGGTGTACT
GTGATGGAAG GTGAGGCTTT TTCTGACCAA GCTATAGCCG AATATATGAA TGCTAATTTT
TTGCCTATCA AAGTAGATAG GGAAGAAAGA CCAGATATCG ACAGCATTTA TATGCAGGCT
TTGCAGATGA TGAGTGGTCA GGGAGGCTGG CCTTTAAATG TCTTTCTTTC ACCAGAAGAT
TTAGTCCCGT TTTACGCTGG TACTTATTTT CCTTTGGAAC CAAAGTACAA TCGTCCAGGT
TTTTTACAAG TACTAGAAGC ACTACGCCGC TATTACGATA CGGAAAAAGA GGATTTGCGC
CAACGGAAAG CCTTGATTGT GGAATCGCTC CTCACCTCTG CGGTATTAAA AGGGGAAGCT
ACCCAAGAAG CTGAAGAAAG CGAATTATTA AGGAGTGGTT GGGAAACTAA CACAGGGGTA
ATTACTCGCA ACGAATACGG TAATAGTTTT CCGATGATTC CTTATGCTGA ATTAGCATTG
CGGGGAACTC GATTTAATTT TGCGTCTCGA TATGAGGGAG AGCAAATTTC GACTCAACGG
GGTCTAGATT TGGCTTTAGG TGGGATTTAT GACCATGTGG CTGGGGGATT CCACCGTTAC
ACTGTTGACC CTACTTGGAC TGTTCCCCAC TTTGAAAAGA TGCTTTATGA CAATGGGCAA
ATTGTCGAGT ATCTAGCAAA TTTATGGAGT GCGGGAGTCC AAGAGCCATC TTTTGCAAGG
GCTGTGACTG GAACTGTGGC ATGGCTGCAA AGGGAAATGA CTGCACCGGC AGGTTATTTT
TACGCGGCTC AAGATGCTGA TAGTTTCACA ACTCCCACGG ACACAGAACC AGAGGAAGGT
GCTTTTTACG TCTGGAGTTA TGCTGAGTTA GAACAACTGT TAACACCAAC AGAATTAACG
GAATTACAAC AGCAATTTAC AGTCAGTCCT CAGGGTAACT TTGAAGGTAA GAACGTACTG
CAACGCCGAC ACCAATGGGA ATTGAGCGCA ACTATAGAAA CTGCATTAGG AAAATTGTTT
GTGGCTCGTT ATGGTAGTGC TGCGGATACC CTAGAGACTT TTCCACCAGC ACAGGACAAC
CAGGAAGCAA AAACTACTCA CTGGCCAGGA CGTATCCCTT CGGTGACGGA TACTAAGATG
ATTGTGGCTT GGAATAGTTT GATGATTTCT GGTTTGGCTA GGGCTGCTGC GGTATTTCAG
CAACCTTTGG CTGGGGAACT AGCAGCTAAG GCGGCGAACT TTATTTTAGA AAATCAATTT
GTTGATGGGC GGTTCTACAG ACTCAACTAT CGAGGGGAAG CGGCTGTGTT GGCTCAGTCG
GAAGATTATG CTTTATTTAT TAAAGCGCTG CTAGATTTAC ACGCAGCCAC ACCTGAAAAT
AGATTTTGGT TAGAAAAAGC GATCGCACTA CAACAACAAT TCGATGAGTT TCTCTGGAGT
ATAGAGCTTG GTGGTTACTT TAATACAGCG AGTGATGCTA GTCAAGATTT GATTATACGA
GAACGTAGCT ATATGGATAA TGCTACACCC TCAGCTAACG GTGTGGCGAT CGCTAATCTC
GTGCGTCTGT CATTACTCAC CGATGATTTA CACTATCTCG ATTTAGCTGA GGCTGGGTTA
AAAGCTTTTA AAACTGTCAT GTCTAGCGCA CCGCAAGCTT GTCCTAGTTT GTTCACGGCT
TTAGATTGGT ATCGTAACTC TACTTTGATT CGTAGCACAA TTGAGCAGAT TAATTCTCTA
ACTCCCCAAT ACTTACCCAC AGTTGCATTC TCTGTAGTAT CTAGTTTACC TGACAATAGT
GTGGGCTTAG TTTGCCAAGG CTTGAAGTGT TTACCATCGG CTAATAGTGT GGAACAGTTA
TTACAGCAAG TGCAGCAAAG TCAAAATAGG GGATAG
 
Protein sequence
MRANKFSTHH SFKLDWANKA TTTICIMTNR LAQTKSLYLR KHAENPIDWW PWCDEALATA 
KSQDKPIFLS IGYSSCHWCT VMEGEAFSDQ AIAEYMNANF LPIKVDREER PDIDSIYMQA
LQMMSGQGGW PLNVFLSPED LVPFYAGTYF PLEPKYNRPG FLQVLEALRR YYDTEKEDLR
QRKALIVESL LTSAVLKGEA TQEAEESELL RSGWETNTGV ITRNEYGNSF PMIPYAELAL
RGTRFNFASR YEGEQISTQR GLDLALGGIY DHVAGGFHRY TVDPTWTVPH FEKMLYDNGQ
IVEYLANLWS AGVQEPSFAR AVTGTVAWLQ REMTAPAGYF YAAQDADSFT TPTDTEPEEG
AFYVWSYAEL EQLLTPTELT ELQQQFTVSP QGNFEGKNVL QRRHQWELSA TIETALGKLF
VARYGSAADT LETFPPAQDN QEAKTTHWPG RIPSVTDTKM IVAWNSLMIS GLARAAAVFQ
QPLAGELAAK AANFILENQF VDGRFYRLNY RGEAAVLAQS EDYALFIKAL LDLHAATPEN
RFWLEKAIAL QQQFDEFLWS IELGGYFNTA SDASQDLIIR ERSYMDNATP SANGVAIANL
VRLSLLTDDL HYLDLAEAGL KAFKTVMSSA PQACPSLFTA LDWYRNSTLI RSTIEQINSL
TPQYLPTVAF SVVSSLPDNS VGLVCQGLKC LPSANSVEQL LQQVQQSQNR G