| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0539 |
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| Symbol | |
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| ID | 3682369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 680088 |
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| End bp | 681767 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637715867 |
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| Product | transposase IS4 |
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| Protein accession | YP_321058 |
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| Protein GI | 75906762 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.892761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTAG CATCTACAAA GATTATGACC CTGCACCCGC GTGATATGTC GCAGATTCCT
GAAACAACAG CGCAAGTAGC CCGGAATTCA TTTCCCAAAG GGAACATATA TATGAAGATG
CGGGATGAAA TAGGAGTGTT ATATAAGGAT GAGGATTTTG TCAAACTTTA CCGCGCAGAT
TGTGGTCAAA GTGGAATATC AGCAGGACAA CTGGCATTAG TGACAGTAAT GCAATTTATC
GAAGGTTTAA CGGATAGACA AGCGGCGGAT GCAGTGAGGG GTCATATTGA TTGGAAATAC
GCACTATCGT TGGAATTAAA TGACCCAGGG TTTGATTATT CAGTACTTTC AGAATTTCGT
CAGCGATTAA TCAAAGCAGG ACGAGAGCGA GAGTTACTCA ACCAAATGCT AGCTCGTTTC
CAAGAACTAG GTTGGCTCAA AAATCGCGGC CGTGTCAGAA CTGATTCAAC TCACGTATTA
GCCGCAGTAC GACAGTTAAA TCGTTTGGAA TTAGTGGGAG AAACTTTACG TCATACCTTA
AATGACTTGG CTTATTTTGC CCCTGATTGG CTCAAATCGA GAGTTGACGT TGATTGGTTT
GAACGTTACT CCCTGAGATT TGAGCAATAC CGCTTGCCCA AATCAAAAGC CGAACGTGAG
AAATTGAGGC GAAAAATTGG TGAGGATGGT CATCATTTGC TATCCGCTTT GTATGCAGAC
TCAACTTGTA ATTGGCTGTG GCAGATTCCA TCAGTGGAAA CATTACGTAT AGTTTGGGTG
CAACAATACT ATATTCAATT GCAACAAGTC TATTGGCGAG AACAAGATAA CTTACCACCA
AATAGACTAC AGATTGAATC TCCTTACGAT GTTGATGCAC GCAATTCCAG CAAGCGAGAA
ATCAACTGGA CTGGTTATAA TCTGCATCTG ACAGAAATTT GTCACCCCAT ACTGCCAAAC
TTAATTATCA ATGTGGAAAC GTCCGTGGCC ACAAGTGCGG ATGTTGAGAT GACACCAGTA
ATTCATTCTC GTTTAAACCA GAACAATCTT TTGCCACAAG AACATGTTGT CGATACTGGC
TATGTCAATG CTCAAAACTT AGTCGATAGT CAATCCCATT TTCATGTTGA TTTAGTAGGA
AAAGTTCCCC CCGGAACTAG TTGGCAAGCA ACAGCACAAT CCGGCTTTGA GCAAAATTGC
TTCACTATTC ATTGGGATTT GATGCGTGTT GATTGCCCAA TGGGTAAACA AAGTAAGTCC
TGGCGTACAA CTGTCGATAG CCATGACAAT CCAGTAGTCA AAATACAATT TGACAAATCC
GATTGTTCGC TTTGTTCAAG TCGCTCAAAA TGCACTCGCT CCAAAAAACT ACCGCGTCTT
CTGACCCTCA AACCACAGGA ACTACATCTT GCATTACATG ATGCTCGCAT TCGCCAAAAA
ACTGAATCTT TTCAACAAAT TTATCACCAA CGTGCTGGCG TTGAAGGCTT GATTTCCCAA
GCTACTGGTC GCTACCAATT ACGCCGTTGT CGCTACATTG GTCTTGCCAA AACTCTCTTG
CAGCATGTCA TTACTGCTGC TGCTATCAAC TTCAGTCGGA TGTGGGATTG GTGGCAACAT
GTCCCACGCA GTCAGACTCG CGTTTCTCAC TTTGCTCGAA TTGCTCCCAC TGCCTCATAG
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| Protein sequence | MSVASTKIMT LHPRDMSQIP ETTAQVARNS FPKGNIYMKM RDEIGVLYKD EDFVKLYRAD
CGQSGISAGQ LALVTVMQFI EGLTDRQAAD AVRGHIDWKY ALSLELNDPG FDYSVLSEFR
QRLIKAGRER ELLNQMLARF QELGWLKNRG RVRTDSTHVL AAVRQLNRLE LVGETLRHTL
NDLAYFAPDW LKSRVDVDWF ERYSLRFEQY RLPKSKAERE KLRRKIGEDG HHLLSALYAD
STCNWLWQIP SVETLRIVWV QQYYIQLQQV YWREQDNLPP NRLQIESPYD VDARNSSKRE
INWTGYNLHL TEICHPILPN LIINVETSVA TSADVEMTPV IHSRLNQNNL LPQEHVVDTG
YVNAQNLVDS QSHFHVDLVG KVPPGTSWQA TAQSGFEQNC FTIHWDLMRV DCPMGKQSKS
WRTTVDSHDN PVVKIQFDKS DCSLCSSRSK CTRSKKLPRL LTLKPQELHL ALHDARIRQK
TESFQQIYHQ RAGVEGLISQ ATGRYQLRRC RYIGLAKTLL QHVITAAAIN FSRMWDWWQH
VPRSQTRVSH FARIAPTAS
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