Gene Ava_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0535 
Symbol 
ID3682365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp672612 
End bp673994 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content42% 
IMG OID637715863 
ProductRieske (2Fe-2S) region 
Protein accessionYP_321054 
Protein GI75906758 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACA CTAACCCAAC TTTAGAACAG ATATTGCCAG GCGGTAGTGA CCCTCATAGT 
TTTGATTGGC ATGAAGCTTG GTATCCAGTC CACTACTTAG AAGATTTAGA TAAATCGAAA
CCCACAGCTT TTACCTTATT AGGTAAAGAT ATTGTCATTT GGTGGGATCA GCAATCTCAG
ACTTGGCAAG CGTTTGAAGA TCAATGTCCT CACCGTTTAG CACCACTTTC TGAAGGCAGA
ATTAATGAGG AAGGACTGTT AGAGTGTCCC TATCACGGTT GGAGTTTCGC TGGAGATGGC
AGTTGTCAGC GCATACCTCA ACAACCAGAA GGCGGACAAG CTGAGACTTC CCAGCGCGCC
TGTGTAACAT CTTGGCTGAC CACAGAACGC CAAGGAATGT TATTTGTTTA CATAGGCAAC
CCAGAAAACG CAGCCAAAAC TAAAATTCCT GTAGTTGAAC CATTAGAAGA ATCTCCTGAT
GGTTGGGTCA TCATAAATAC GTTTAGAGAT GTGCCTTATG ATGCCCTCAC ACTTTTAGAA
AACATACTCG ACCCCAGTCA TTTAGCCTAC ACCCATCACA AAACTGTAGG AAATCGGAAA
AATGCTGCTC CCTTAGAACT AGAGGTAGTT GTATCTGGAA AACATGGTTT CAAAGGTGTT
TGGCATCAAA GCATCAAAGC CGGACAATCA GAATTATCTA CAACTTTCGT TGCACCAGCT
TTAATGTGGC ATGATATCAA CAGCGAACGA GGACGCATCT TAACTGTTGT CTATGCTACA
CCTATTCGTA AAGGTGAGTG TCGTTTATTT GCTCGGTTTC CTTTTAAGTT TCCTTCCAAA
CTACCAGGGA TTTTTATTAA ATTAAGACCA CGTTGGTACT ATCATCTGGG ACAAAATGGT
GTTTTAGAAG ACGACCAAAT TTTTCTCCAC TATCAAGAAA GATATCTCCA AGCCAAAGGG
GGTAGTCCTA ACTTTACAAA AGCGTTTTAC CTACCAACCA AAGCTGACAG TTTTGTGTTT
GAACTGCGCC AGTGGGTGAA CAATTACAAC GCTGAACCAT TTCCAGGACA AGCTTTTTCG
CAGGCCATAC CCAAAGAACA ACTCTTAGAA AGATACTATT CACACACAAT AAAATGTGCC
AGTTGTAGAA ATGCTTTAGC TAAAATCCAG AAACTACGAT TATGGAGTGG AGTAATTACA
GTTATCTCAT TGGTAAGCAC TCCCTTAATC ACACTATTTT TTGACGCGTC ATCAATTCCG
GCTATCCTCA TTGAGACAGT CACACCAATT ACTTTTGCAG TTATATGGCG GGGATTAAGC
AAACTCGAAA AGCAGTTTTA CGAAGGGCGA ATTATCCCAC CACGCAACTT ACCTAACAGT
TAA
 
Protein sequence
MVNTNPTLEQ ILPGGSDPHS FDWHEAWYPV HYLEDLDKSK PTAFTLLGKD IVIWWDQQSQ 
TWQAFEDQCP HRLAPLSEGR INEEGLLECP YHGWSFAGDG SCQRIPQQPE GGQAETSQRA
CVTSWLTTER QGMLFVYIGN PENAAKTKIP VVEPLEESPD GWVIINTFRD VPYDALTLLE
NILDPSHLAY THHKTVGNRK NAAPLELEVV VSGKHGFKGV WHQSIKAGQS ELSTTFVAPA
LMWHDINSER GRILTVVYAT PIRKGECRLF ARFPFKFPSK LPGIFIKLRP RWYYHLGQNG
VLEDDQIFLH YQERYLQAKG GSPNFTKAFY LPTKADSFVF ELRQWVNNYN AEPFPGQAFS
QAIPKEQLLE RYYSHTIKCA SCRNALAKIQ KLRLWSGVIT VISLVSTPLI TLFFDASSIP
AILIETVTPI TFAVIWRGLS KLEKQFYEGR IIPPRNLPNS