| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0527 |
|---|
| Symbol | |
|---|
| ID | 3682357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 664358 |
|---|
| End bp | 665359 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637715855 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_321046 |
|---|
| Protein GI | 75906750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG AAAATTTTAA ACAGCTCACC AAGGGCGGGC AGAAGGTATC GTTCATGAAC
GAATTTGTCC TAGAACAACA AAATGAAACG GCAGCAGAGC AACAAAAGCC CAAGGATATG
ATTCGTCGCT TGGTGTGGAA AATGTCTATA GCCACCTTGA TTTTGATGGC AATAGGCTCT
GCCACCCGTG TGATGAATGC TGGCCTAGCT TGCCCAGATT GGCCTCTCTG TTATGGCGAA
TTAGTCCCAG CCAAGCAAAT GAATCTCCAA GTGTTCTTGG AGTGGTTCCA CCGACTAGAT
GCGAGTTTGA TCGGCCTGAG CGCGATCGCT CTGTTTGGTT TATCCTGGTG GCATCGCCGT
GCTTTACCCT CCTGGCTACC TTGGGCATCA ACTTTTGCCC TCTTCTTAAT TGTCTTTCAA
GGCATTCTGG GAGGACTAAC AGTCACCGAG TTATTGCGGT TTGATATCGT CACCGCCCAC
ATGGGAACCG CGCTGTTATT TTTCACTAGT CTACTAATCA TTGGCATAGC CCTCACTCCC
TATCAGGGTA CAGGCAACGT TGGTAAGCTG CCTTGGGTGG GCTTAGTAGC CGCCATTTTA
GTTTACGTAC AAAGTCTCTT AGGCGCTTTA GTCGGCTCTC GTTGGGCTTT ACACCAATGC
TTTGGTGGTT CCCAACTTTG CAATGTGATG TACAGCCATA TTTTTGGTTT AGTACCGCCA
ACAGTAGCAA CCCTAGCAGT GGTTTTGATT TCCTGGCGGA CACCAGCGTT ACATCCTGCT
TTGCGACGAT TAGCTAATAT GGCAGGAGGA TTGTTAATTT TACAAATCCT CTTGGGATTT
GCCACCTTCC GCCTACATCT CCAAGTCGAA CCTCTAACAG TCTCTCACCA AGCGATAGGA
GCTACTCTGC TCGGTACTTT AGTAGCTTTT ACCGTCCTAG CACTACGCGA CTGGGCTACG
GTTGGTTTAA CAGCAACTGC CACAAATACC CAAATGAGAT GA
|
|---|
| Protein sequence | MKIENFKQLT KGGQKVSFMN EFVLEQQNET AAEQQKPKDM IRRLVWKMSI ATLILMAIGS
ATRVMNAGLA CPDWPLCYGE LVPAKQMNLQ VFLEWFHRLD ASLIGLSAIA LFGLSWWHRR
ALPSWLPWAS TFALFLIVFQ GILGGLTVTE LLRFDIVTAH MGTALLFFTS LLIIGIALTP
YQGTGNVGKL PWVGLVAAIL VYVQSLLGAL VGSRWALHQC FGGSQLCNVM YSHIFGLVPP
TVATLAVVLI SWRTPALHPA LRRLANMAGG LLILQILLGF ATFRLHLQVE PLTVSHQAIG
ATLLGTLVAF TVLALRDWAT VGLTATATNT QMR
|
|---|
| |