Gene Ava_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0519 
Symbol 
ID3682388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp653046 
End bp653951 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID637715847 
ProductYcf66-like 
Protein accessionYP_321038 
Protein GI75906742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0370943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATT TTGGGCTGAA CTCAGCCAGT GTTCTGGCTC AGGTGAATTT TGGAACGAAC 
TCAGCCAGTA TTCTAGGAAT TTTCCTGGCT GTGGCTGGGG CAGCGCTGTA TTTTCTCCGC
ACTGTGCGTC CGGAACTGTC AAGAGATCAG GATATATTTT TTGCAGCAGT GGGCTTATTG
TGTGGTTTCA TTCTTATTTT CCAAGGATGG CGGTTAGACC CGATTTTGCA ATTTGGTCAG
CTGCTTTTAG TCGGTACAAC TGTATTTTTT GCGGTTGAAA GTATTCGTCT GCGGAGTATA
GCGACTCAAC AAGCGAAACG TAACACCCCG ATTGTGGATG ATGAACGACC AGTCAGCAAA
AATTATTCTT ACAACCGACG GAAATATGAG GCTGAGGTAG AAGACGATTA TGCTCCTTTA
CCTTATGAAG ATGAGGAAGA GGAAGAACGT CCAGTACGTG CCAGAATTCG TCCCAGTAGA
GAAGACCGTT CCTCTCGTGA TAACTATTAT GAGGAACAAC CGCCCCGCAA GGAACGCCGT
AACACCACTG ATAGACAGGA ACCAACGGAT AAACCACGCC GCCGTCCTAC CAATCGCCCA
ACAACTAGAA CGTCAGAAAG CTATGAACAA GAAGATTGGG GTTCTGCTTC CAGGCAAGTT
GATGATTGGG AAAGTTCTAG TAGTGAAGTG AGAAGACCTT CTCGCCGGGG CAATAATAAT
CCCCGCCCAG AAGTAGATGA GGATGTGCAA CCCAGACCGA GAAAGCGTCG TCCACCGGCG
GATACAAGTT CTTCCCGTAG AGAACCTCAA GATGATGAAG CTATCCCAAC TGATTACGTA
CCGTACAAAC CCATAGATCA GTCAGATGAA GATTCAGAGA ACTCGACAAA TTTTGATGAT
ATCTAA
 
Protein sequence
MLNFGLNSAS VLAQVNFGTN SASILGIFLA VAGAALYFLR TVRPELSRDQ DIFFAAVGLL 
CGFILIFQGW RLDPILQFGQ LLLVGTTVFF AVESIRLRSI ATQQAKRNTP IVDDERPVSK
NYSYNRRKYE AEVEDDYAPL PYEDEEEEER PVRARIRPSR EDRSSRDNYY EEQPPRKERR
NTTDRQEPTD KPRRRPTNRP TTRTSESYEQ EDWGSASRQV DDWESSSSEV RRPSRRGNNN
PRPEVDEDVQ PRPRKRRPPA DTSSSRREPQ DDEAIPTDYV PYKPIDQSDE DSENSTNFDD
I