Gene Ava_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0514 
Symbol 
ID3682382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp646646 
End bp648358 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content42% 
IMG OID637715841 
Producthypothetical protein 
Protein accessionYP_321033 
Protein GI75906737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA GAAACAAACC ATCTTTAGTG CTGACACTTT CCGCAGCCGG GTTATTAGTT 
GGTGGTGGTG CAGCAGGATA CTGGTTATTT AGCCAGAGAG AAGCATTTTC GAGAAATTTG
TTAGTAGGGG CAAATATTAT TCCGCAAGAT GCCTTATTTG CGGTTTCTCT GAGTACAGAC
CCTAAACAAT GGCAGAAATT GCAGAAATTT GGCACAAAGG AAAGCCAAGC TATAGTTAAT
CAAAATTTGT TACAATTACG CGATCGCTTT CTGACTAATC AAGGTTACAA CTTCGAGCAA
GATATTCAAC CTTGGGTAGG GGATGAAGTG ACCTTAGCAA TTTTAGCTCC TGAGGTAGTT
AAATCAGCAA TTAAACCAGT ATCGACCAAT ACAGAGGTAA CAAGTAGCCA ACAGTCGATG
GTTATGGTTT TACCAGTAAG AAACCCACAA AAAGCCAAAA GTATTTTCGC TCAACCAAAA
AACCCCAATC AAGCCCAGTG GAAAGATAGC ACCTATCAAG GGATTACTAT CAAACAAAGT
GAAGGATCAA GGGGGGAAAA CTTCTCCGCA GCTTTAATAG ACGAGCGTTT TCTTGTCATT
ACCGACAATA TTAAAGTCAC AGAAAAAACA ATTGATGCTT ATAGAAATAA GACAACCTTA
GCAACAACAG GCGGTTTTGC AGAAAACTTC CCAAAAGTAG CTAGTTATCA GCCTTTGGCT
CAGTTTTATG TAAATGTCCC CAACGCTGCA AAAATAGCCG CCATTGCTCC TAATCGTCGC
TTACCAGCAC AAGTTTTAGC ACAACTGCAA AATAACCAAG GTTTAGCCGG GACTGTAACT
TTAGAGCCAG AAGGGATACG CATCAAAGGA GTTTCATGGC TCAATCCTCG TAGTCAGCGT
GTATTGGCAG TAACAAATAA AGCTGGCAAT ATGCAAAATC GTGTACCAGC AGAAACCATT
ATGATGCTGT CTGGGGGAGA TTTACAACGC TTATGGAGTG ACTACGTTTT AACATCTCAA
GGTAATCCTC TTGCGCCAGT GACACCAGAA CAACTGCGGA GTGGAGTTAA ATCACTAACG
AATCTCGACT TAGAAAGAGA TTTACTCAAG TGGATGAGAG GAGAGTTTGC TGTATCTTTA
ATTCAAGGTA CTCCCAAGCC AAGTTCACAG GAAGATTTTC GCGCGGCTTT GGTGTTAATG
ATCCAAGCAA ATGATACCTC CGATGGTCAA AGCCGACGCA AACTAGCTGA AACAGCCATT
AAACAGCTAG ATGAGGTGAT GAAAAATCAA TACCAATTCC AAATTCAACC CGCAACCGTA
GCAGGTAAAC CCATCACTAA TTGGATTAGC CCCTATGGAA CTCTCACGGC TACCCACGGT
TGGTTGGATG GAAACGTTTT CTTCCTATCA ATAGGCGCTC CCATTACCGA TAAAATTGTT
CCCAAACCCA ATAACACCCT TGCTAATAGT TTGGCATTTC AACAAACAGT ACCAGTAGAA
CCGAATCCCA CCAACGGTCA GTTTTACTTG GATGTGGAAC AGACAGCAAA AAACTTCCCC
CTACCAAGAC TGATACCTAA GCAACAAACC TTGTTAGCTG CAACGCGTTC CATCGGTGTG
ACGACTGCTG TTAGCGATAA TCGCAGCACC CGCTACGATA TTTTTCTCAC ACTCAAAAAA
GCTGATAATT CTGCTGCTGT AACCAATCCG TAG
 
Protein sequence
MNKRNKPSLV LTLSAAGLLV GGGAAGYWLF SQREAFSRNL LVGANIIPQD ALFAVSLSTD 
PKQWQKLQKF GTKESQAIVN QNLLQLRDRF LTNQGYNFEQ DIQPWVGDEV TLAILAPEVV
KSAIKPVSTN TEVTSSQQSM VMVLPVRNPQ KAKSIFAQPK NPNQAQWKDS TYQGITIKQS
EGSRGENFSA ALIDERFLVI TDNIKVTEKT IDAYRNKTTL ATTGGFAENF PKVASYQPLA
QFYVNVPNAA KIAAIAPNRR LPAQVLAQLQ NNQGLAGTVT LEPEGIRIKG VSWLNPRSQR
VLAVTNKAGN MQNRVPAETI MMLSGGDLQR LWSDYVLTSQ GNPLAPVTPE QLRSGVKSLT
NLDLERDLLK WMRGEFAVSL IQGTPKPSSQ EDFRAALVLM IQANDTSDGQ SRRKLAETAI
KQLDEVMKNQ YQFQIQPATV AGKPITNWIS PYGTLTATHG WLDGNVFFLS IGAPITDKIV
PKPNNTLANS LAFQQTVPVE PNPTNGQFYL DVEQTAKNFP LPRLIPKQQT LLAATRSIGV
TTAVSDNRST RYDIFLTLKK ADNSAAVTNP