| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0505 |
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| Symbol | |
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| ID | 3682373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 629243 |
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| End bp | 636220 |
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| Gene Length | 6978 bp |
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| Protein Length | 2325 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637715832 |
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| Product | CheA Signal transduction histidine Kinases (STHK) |
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| Protein accession | YP_321024 |
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| Protein GI | 75906728 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.806325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGG AACAACAACA GAGGATTTTA GGTTACTTTA TTGAAGAGGC GAGAGACCAC
CTGAATACAA TCGAACAGGG GTTGCTCAAT CTTGAGAGTA CCTTAAACGA CCCGGAAATG
ATCAACGAAG TTTTCCGGGC GGCTCACTCC ATTAAAGGAG GAGCAGCAAT GCTTGGTTTA
ACTAGCATTC AGCACACTTC CCATCGTTTA GAAGATTGTT TCAAAATTCT TAAAGACAAT
CCGGTTCAGG TTGACCAAAA ACTAGAGTCC TTATTTCTTG GGGTTTCTGA TACCCTAAAG
GCGCTATTAG AACAGTTAAG CGGGCCGTTC GGTTTATCGG AAGAAGTTGC TAATACTTTG
ATGTCGGAAA CTGAGCCAGT TTTTCAATGG CTACATGAGC ATTTGGAACA ACTGGTACAA
AAAGGTGGCA CTGCTGAAAT TGGTGATCAT GCAGTAAGTA AGCCAAACAC AGCAGATAGT
GTGGGTACAC TCACAGAAAT ATTCTTTCGC CAAGATGTTG CAACTCCAGC AGAAGCAACC
CCCAAAACTT CTCCAGTTTT ACCAACCTAT TCTCCCATTG TTGCTACAGA TAGCGATCAG
TGGAGCGAGT TTCAAGCCCA GGTTTTACAA ACTCTCAGGG AGATGTTGCA ACTATTTAAG
CAACCAGCAA CACCAGCATC TCGGCAAAAT TTACAAGACT GCTGCAATCA GTTAGTCAAA
CTCGGAAAAA CATGGAATTT GCCTAACTGG TGTAATCTAT GCAAAGCTGC AGCTAATGCG
ATCGCTAATC AAGAAAATAC CTATCTGACT TTAGCTAAAA TTGTCATTAC AGAAATTAAA
CAAGCTCAAG AATTAGTTCT GCGAAGTAGG GAATCTGAGA TTACAATTAG TCACCGACTG
GAAGCACTCT GGGGTTTTCC AGAAATGCCC TTGTTAGAAG TAGCACAAAA TTTACTGGGT
GATGTTCCCA CTGCTGTTAG TCAATCATTC ATAACACCAA TAACCCCCAC ATCTGAACCG
ACAATTACTA ATAACGAAAT TAGTGCGCCT TTAATTGAAT CACCAACAGA CAGTGTAACT
AGTTTCACTG AAATATCTGA CCAACTTTCT CCTCAAAGTG CCATAGCAGA AAGCATTGCG
AACACGGATA TTGCATTTGA TCATGAAGAC CAAACAACCT ATACTACTAA TAAAATTCAT
ACCCACGGGC CAGAAGTAGG ATTAGCTGAG TTAAATACTC TTGCTGACTT GTTTGAAGGT
GAGACACCAG AACTCGATGA AACATGGCAA CAAGAAGAAA TTATTGATAT TAATAATGCT
AGTAATTTAG GTGTGGATGT CAGCGAAAGT ACTGATGAAG CAATTGATAG TGATCTTGCT
GATTTTCTAT CACTGGAAGA AGATAAAGAA GAGTCCGAGA AAACTATAAA TAATACAGAA
GATTTAAGCT TACTTTTTGG AGAAAACTTC TTAGAGAAAA ATAATTTAGA ATCACTTGAT
TTATTTAAAG CTCCTGTTAC TGCGGGTGAA ATAATACAAG AAGCTAGAGA TAATGCTAAT
CAGTTGCCAG ATTCTGATGA TGTCATAGAT GATTTGTTGG CATTAAAAAT CGATGATGAA
ATCCAGAATA GCAATGAATT AGAGCAGACA AACACCTCAA GCGATTTTGA TGATTTATTT
TCAGATACAG AAACTAATCT ACCCACTAAT TCCGAGTTAC AGCTAATAGC ACTACCAGAA
GACTTATCGC TAAATAACAT ATTTAATGAT TCAGAGGAAA ATAAGCAATT ATTAACTGAA
AAATCAGAAA TTAGTGATTT ATTGGATTTA CCACCAGTAG ATAATTTAGG GAATCTATGG
AACTCGGCAA CTGAAGTAGA ACCGGAGCAA ATATTAGAGT CTGTAATAGA AGAAGATATA
GCCCAAGCTT TAGAGGAAAG TTTGTTTGAA GCTGCGGCTT CTGGAGACAT TTTCGTTGAA
AATCGACAAT TTACATCACA TTTAAATGAA AGTTTAGATC CAGATGATCT AAATATCACT
TTCTTACAGG ATGAACAGCA GTTAGATTTG CTATTCGCAT CAGATACAAG TGATGATTTA
TTTGGGGAAT TAACTATAAA TACGCATGAT ACTCATAGGA TTGATGTTAT TAGTGATGAT
ATCCAATTCT TAAGAGAAAT TAGTCAAGTT TCTCCACCTG AGATTCATGA TTTTTCACAG
CAACCAGAAG TTTTAGATTT TACCCCTGAA TTTACTACGC AAATTCAAGA ACTATCTGCT
ATTGATGATT TATCATCATT AACGAGCGAT TTAACAGATA TCACTTTTAC AGAAACGAAT
GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA TGATGATTTA
TCAGCATTAA ATAGTGATTT AACAGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT
TTAGAAACAG TTGCAGAAAC TAACGAACTA GATTTGGATG ATGACTTATC AGCATTAAAT
AGTGATTTAA CAGATATCAC TTTTGCAGAA ACACATGATT CTTCCAGTTT AGAAACAGTT
GCGGAAACTA ACGAACTAGA TTTAGATGAT GACTTATCAG CATTAAATAG TGATTTAGCG
GATATCACTT TTGCAGAAAC ACATGATTCT TCCAGTTTAG AAACAGTTGC GGGAACTAAC
GAACTAGATT TAGATGATGA TTTATCAGCA TTAACTAGTG ATTTAGCGGA TATCACTTTT
ACAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTGCAG AAACTAGTGA ACTAAGTTTA
GACGATGATT TATCAGCATT AACTAGTGAT TTAGCGGATA TCACTTTTAC AGAAACGAAT
GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA
TCAGCATTAA CTAGTGATTT AGCGGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT
TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGACG ATGATTTATC AGCATTAACT
AGTGATTTAG CGGATATCAC TTTTACAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT
GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAACA
GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC GGAAACTAAC
GAACTAGATT TAGATGATGA CTTATCAGCA TTAAATAGTG ATTTAGCGGA TATCACTTTT
GCAGAAACAC ATGATTCTTC CAGTTTAGAA ACAGTTGCGG GAACTAACGA ACTAGATTTA
GATGATGATT TATCAGCATT AACTAGTGAT TTAGCGGATA TCACTTTTAC AGAAACGAAT
GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA
TCAGCATTAA CTAGTGATTT AGCGGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT
TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGACG ATGATTTATC AGCATTAACT
AGTGATTTAG CGGATATCAC TTTTACAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT
GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAGCG
GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC AGAAACTAGT
GAACTAAGTT TAGACGATGA TTTATCAGCA TTAACTAGTG ATTTAACAGA TATCACTTTT
ACAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTTCAG AAACTAGTGA ACTAAGTTTA
GACGATGATT TATCAGCATT AACGAGTGAT TTAACAGATA TCACTTTTAC AGAAACGAAT
GATTCTTCCA GTTTAGAAAC AGTTTCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA
TCAGCATTAA CGAGTGATTT AACAGATATC ACTTTTGCAG AAACACATGA TTCTTCCAGT
TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGATG ATGATTTATC AGCATTAAAT
AGTGATTTAA CAGATATCAC TTTTGCAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT
GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAGCG
GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC AGAAACTAGT
CAACTAAGTT TAGATGATGA TTTATCAGCA TTAAATAGTG ATTTAACAGA TATCACTTTT
GCAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTGTCG AAACTAACGA ACTAGATTTG
GCTGATGATT TATCGGCTTT AACCTTAGAT GAGTTAATCA CGGAAAATCA CAACTTTATA
AGTATTGCGG TTGATGACAA TACCTTATCT ACCTCAGAAT TTAGCGAATT GGGGTTATCT
CTGACAAATG ATGAAAATCC AGAAGATATT GCAGATTCAT CAGGGCTTTT AATAGATATA
AATCCAGCCA CGGAAGATGT AGCCGGGGTT GAAGTAGAGA ATGTGGTTTC TACTTCAATA
GATATCCCAG AATCAGTCAA GTCAGATACT TATATTCAAG ATGATTTTGC TGATTTAGAA
GCATTGTTAG AAATAGAAGA ACCTACATTC AGTGCTGATA ATGACTCCAT AGCAGGAGAT
GATTTTGCTG CTTTAGAAGC ACTTCTGGGT GAAGACAATC CGGAAACAGC ACTGGATGAG
CCACCTGCTT TAGCTAAAAT CATCAAAACT ACTCCTACTG TTTCCGTAAC ACCAGCGCCG
TTGGCAGATG AATTTAGTGA TCTGGAGAAA CTTTTAGCAG AAGCAGACCA AACCATCTCC
CATTCATCAC CAGTCAAACC AACGGTAGGA AAAACTCCAC GTACTTCTAA TCGACGGACT
GCGAGATTTG AAGAAACGAT GAAAGTGCCG GTCAAGCAGT TGGATGAAAT GAGCAATTTG
GTCGGTGAAC TAGTAGTCAA CCGCAACACC TTAGAGCAGG ATCATGAACG ACTGCGACAA
TCATTAGATA ACTTGCTAGT TCAGGTGCAA CAACTCTCAG ACGTGGGTGC AAGGATGCAG
GAATTATATG AGCGATCGCT CTTAGAAGCT TCTTTATTAG CTAGTCGCAA AACTAGAGAG
CCTGTCTACG AAGTACCGGA TGCGAATAGC GATCGCGGTT TTAGCGAATT AGAAATGGAT
CGCTTTACTC CCTTCCACAC ACTGTCTCAG GAAATGATTG AATTGATTGT CAGGGTGCGG
GAGTCAGCGA GTGACATTGA TTTCGTCACT GAAGAAACCG AACGAGTAGC CAGACAATTC
CGTCAAGTGA CCACTCAACT GCAAGAAGGT CTGACACGCG CCCGCATGGT GCCATTTTCC
CAGACAATTG ACCGCTTGCG GCGGGGAGTG CGCGACAACG CCATCAAGTT TGGTAAACAG
GTGGAATTAG TGATTGAAGG TGGCGATACC CTCATTGACA AGATGATTTT AGATCATCTC
AATGACCCAC TAACCCATAT GCTCAACAAT GCGATCGCTC ACGGTATTGA AACCCCAGAA
ATTAGGGAAG CATCTGGCAA ACCACCCGTG GGAACCATTA CTATCCGCGC CTTTCACCAG
GGGAATCAAA CTGTAATTTC TGTAGGAGAT GACGGTGCAG GAATTGATCC CGAACGCATC
AAAGCCAAAG CAGTGAAGCT GGGGATTATG ACACCAGAAC AGGCTAGAAC TATTTCTCGC
CTGGAAATTT ATGACCTACT ATTCCAGTCT GGTTTTAGTA CCAAAGATGA AGCCGATGAA
ATTGCTGGTC GTGGTGTGGG AATGGATGTG GTGCGTTCCG AAATTAGTGA AATTCGCGGG
GCGGTAAATA CAGATTCTAC TGTTGGCAAG GGAACCACCT TCACGATTCG TCTACCATTA
ACCTTGAGTA TTTGTAAGGC TCTGTGCTGT GTTTCTGATA AAGCACGGAT TGCCTTTTCA
ATGGATGGTG TGGAAGATAC CCTAGATATA CCCAGCAAAA ACGTCCAACA TAACGCTGAT
GGACAATCAT TCATCTCTTG GCGGGATACG GTTTTACCTT TCCGACCATT GAAAGAACTG
TTAACCTTCA ATCGTCAACT CGGTCGCGGT AATGTCTACG GTGGTACTAG AGATGATGAT
ATGATTTCCG TCGTCGTTGT GCGATCGGGT AATACTTTAA TCGCTCTCCA GATTGACCAA
GTATTGAGTG AGCAAGAAAT TGTTATTAAA CAATTTGAAG GCCCAGCACC TAAACCAATA
GGTGTAGCAG GGGCTACGGT CTTGGGCGAT GGTCGCATTA TGCCCATTGC TGATGTACTA
GAAATTATCG ACATCTTCCA AGGACGGATG TCCAAACACG CTGGTGGCGC ACCTTGGCAA
CAAACACCAC CAATTGCGAT CGAAATCCCA TCTGTGAAGA TTGACCCAAC TGTGCTGATT
GTAGATGACT CGATCACAGT CCGAGAGTTG TTGTCCCTCA CCTTTAATAA AGCGGGTTAT
CGCGTTGAAC AAGCTCGTGA TGGTCAAGAG GCTTGGGACA AACTCCGTTC CGGTCTGCCT
TGTGATATCG TCTTCTGCGA TATTGAAATG CCCCGTTGCG ACGGACTAGA GTTACTCTCA
CGTATTCAGA AAGACTCCAC CCTTAACCAT TTACCCATTG CTATGCTCAC CTCAAGAGGT
GCAGATAAAC ACAGACAGAT GGCAATTCAA CTCGGTGCTA GTGGATACTT TACTAAGCCT
TACCTAGAAG AGGCTTTACT AGAAGCCGCA GTGCGGATGT TGAAAGGTGA GAAGTTAGTC
AGTCAAATAA ACGCTTAA
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| Protein sequence | MLPEQQQRIL GYFIEEARDH LNTIEQGLLN LESTLNDPEM INEVFRAAHS IKGGAAMLGL
TSIQHTSHRL EDCFKILKDN PVQVDQKLES LFLGVSDTLK ALLEQLSGPF GLSEEVANTL
MSETEPVFQW LHEHLEQLVQ KGGTAEIGDH AVSKPNTADS VGTLTEIFFR QDVATPAEAT
PKTSPVLPTY SPIVATDSDQ WSEFQAQVLQ TLREMLQLFK QPATPASRQN LQDCCNQLVK
LGKTWNLPNW CNLCKAAANA IANQENTYLT LAKIVITEIK QAQELVLRSR ESEITISHRL
EALWGFPEMP LLEVAQNLLG DVPTAVSQSF ITPITPTSEP TITNNEISAP LIESPTDSVT
SFTEISDQLS PQSAIAESIA NTDIAFDHED QTTYTTNKIH THGPEVGLAE LNTLADLFEG
ETPELDETWQ QEEIIDINNA SNLGVDVSES TDEAIDSDLA DFLSLEEDKE ESEKTINNTE
DLSLLFGENF LEKNNLESLD LFKAPVTAGE IIQEARDNAN QLPDSDDVID DLLALKIDDE
IQNSNELEQT NTSSDFDDLF SDTETNLPTN SELQLIALPE DLSLNNIFND SEENKQLLTE
KSEISDLLDL PPVDNLGNLW NSATEVEPEQ ILESVIEEDI AQALEESLFE AAASGDIFVE
NRQFTSHLNE SLDPDDLNIT FLQDEQQLDL LFASDTSDDL FGELTINTHD THRIDVISDD
IQFLREISQV SPPEIHDFSQ QPEVLDFTPE FTTQIQELSA IDDLSSLTSD LTDITFTETN
DSSSLETVAE TSELSLDDDL SALNSDLTDI TFTETNDSSS LETVAETNEL DLDDDLSALN
SDLTDITFAE THDSSSLETV AETNELDLDD DLSALNSDLA DITFAETHDS SSLETVAGTN
ELDLDDDLSA LTSDLADITF TETNDSSSLE TVAETSELSL DDDLSALTSD LADITFTETN
DSSSLETVAE TSELSLDDDL SALTSDLADI TFTETNDSSS LETVAETSEL SLDDDLSALT
SDLADITFTE TNDSSSLETV AETSELSLDD DLSALTSDLT DITFTETNDS SSLETVAETN
ELDLDDDLSA LNSDLADITF AETHDSSSLE TVAGTNELDL DDDLSALTSD LADITFTETN
DSSSLETVAE TSELSLDDDL SALTSDLADI TFTETNDSSS LETVAETSEL SLDDDLSALT
SDLADITFTE TNDSSSLETV AETSELSLDD DLSALTSDLA DITFTETNDS SSLETVAETS
ELSLDDDLSA LTSDLTDITF TETNDSSSLE TVSETSELSL DDDLSALTSD LTDITFTETN
DSSSLETVSE TSELSLDDDL SALTSDLTDI TFAETHDSSS LETVAETSEL SLDDDLSALN
SDLTDITFAE TNDSSSLETV AETSELSLDD DLSALTSDLA DITFTETNDS SSLETVAETS
QLSLDDDLSA LNSDLTDITF AETNDSSSLE TVVETNELDL ADDLSALTLD ELITENHNFI
SIAVDDNTLS TSEFSELGLS LTNDENPEDI ADSSGLLIDI NPATEDVAGV EVENVVSTSI
DIPESVKSDT YIQDDFADLE ALLEIEEPTF SADNDSIAGD DFAALEALLG EDNPETALDE
PPALAKIIKT TPTVSVTPAP LADEFSDLEK LLAEADQTIS HSSPVKPTVG KTPRTSNRRT
ARFEETMKVP VKQLDEMSNL VGELVVNRNT LEQDHERLRQ SLDNLLVQVQ QLSDVGARMQ
ELYERSLLEA SLLASRKTRE PVYEVPDANS DRGFSELEMD RFTPFHTLSQ EMIELIVRVR
ESASDIDFVT EETERVARQF RQVTTQLQEG LTRARMVPFS QTIDRLRRGV RDNAIKFGKQ
VELVIEGGDT LIDKMILDHL NDPLTHMLNN AIAHGIETPE IREASGKPPV GTITIRAFHQ
GNQTVISVGD DGAGIDPERI KAKAVKLGIM TPEQARTISR LEIYDLLFQS GFSTKDEADE
IAGRGVGMDV VRSEISEIRG AVNTDSTVGK GTTFTIRLPL TLSICKALCC VSDKARIAFS
MDGVEDTLDI PSKNVQHNAD GQSFISWRDT VLPFRPLKEL LTFNRQLGRG NVYGGTRDDD
MISVVVVRSG NTLIALQIDQ VLSEQEIVIK QFEGPAPKPI GVAGATVLGD GRIMPIADVL
EIIDIFQGRM SKHAGGAPWQ QTPPIAIEIP SVKIDPTVLI VDDSITVREL LSLTFNKAGY
RVEQARDGQE AWDKLRSGLP CDIVFCDIEM PRCDGLELLS RIQKDSTLNH LPIAMLTSRG
ADKHRQMAIQ LGASGYFTKP YLEEALLEAA VRMLKGEKLV SQINA
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