Gene Ava_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0502 
Symbol 
ID3682409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp626421 
End bp626990 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content41% 
IMG OID637715829 
Producthypothetical protein 
Protein accessionYP_321021 
Protein GI75906725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.909912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA ATGATTGGAG GCGGGAAACT AAAAATATTA GGTTAGGTGT GATAGCAGTG 
ATACCAACAC TGTTGTTTTT GATGTTTTCC CACACTGTTA ATGCTGAAGA TCCAGGTGAA
TGTTTTATGA TTACTACCTC TGGTAGAACC ATTCCCTTGA GAAAGCTGTG TGGTAGTACA
AAGACGGTTC AAAACAGCGC AGAGAGAGTT TTTCGGGTTC CGATTAAACG GCGATTGGGT
AGAACTCCCG TGATTGATGT GACTTTCAAT GATAAGAAAA CCTTTGAAAT GATTGTCGAT
ACAGGTGCAA ACAATACTTT AATACCTCTA AAGTTAGCGA TCGCTCTCCA ACTCCAGCCT
ACTGGGATCA TGAAGGCTCA AATTGCTGAT GGTACACAAG TGGAATTTTC TACTAGTAAG
GTTAGATCGA TCGCTGCTGG TGGAGCCATA GCTAAGAATA TCCAAGTAGC GATCGCGCCT
AAAGCAGAGT TCGGTCTACT AGGTCATGAT TTCTTTGGCA ACTACGACAT CAAGATTTTA
GAAACAGAGG TAGAGTTTCA TCCTCGGTAA
 
Protein sequence
MIKNDWRRET KNIRLGVIAV IPTLLFLMFS HTVNAEDPGE CFMITTSGRT IPLRKLCGST 
KTVQNSAERV FRVPIKRRLG RTPVIDVTFN DKKTFEMIVD TGANNTLIPL KLAIALQLQP
TGIMKAQIAD GTQVEFSTSK VRSIAAGGAI AKNIQVAIAP KAEFGLLGHD FFGNYDIKIL
ETEVEFHPR