Gene Ava_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0485 
Symbol 
ID3682392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp607538 
End bp608095 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID637715812 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_321004 
Protein GI75906708 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.287149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCC GACGCAATTT TCTGCATATT TTGCTTGTCA GCTGCTTTGC TGTCATTAGC 
TGGTTAAATT TTGCCCCTAC TGCCTATGCT CTTGGGGGCA AACTCCCCGC TATTAACCAA
CCTGCACCCG ATTTTACCTT ACCAACCAAT ACAGGTGATG GTAAGCTTTC TCTTGCTGAT
TTTCGGGGTA AGTGGGTGGT CTTGTATTTT TACCCTAAGG ATTTTACATC TGGTTGCACA
ATTGAAGCTC GTCGTTTTCA GCAAGATTTA CCAACCTATG TGGATAAAAA TGTCCAGATT
ATTGGTGTGA GCGCTGATGA TATAGACTCC CATGCTGAAT TTTGTGATTC CGAGGGTCTA
AAATTTCCTT TGTTGGCTGA TACTGATGGT GCAGTTAGTA AAGCCTATGG TTCTTGGATC
GGTTTTGTAT CTATGCGTCA TAGCTTTATC ATTGATCCAC AAGGTATTCT CCGGGAGACT
TTTGTCAAAG TTAACCCGTC TGTTCATAGT ACAGAAGTTT TGGCTCGACT GGAAAAATTG
CAGTCCGCAG CTTCTTGA
 
Protein sequence
MISRRNFLHI LLVSCFAVIS WLNFAPTAYA LGGKLPAINQ PAPDFTLPTN TGDGKLSLAD 
FRGKWVVLYF YPKDFTSGCT IEARRFQQDL PTYVDKNVQI IGVSADDIDS HAEFCDSEGL
KFPLLADTDG AVSKAYGSWI GFVSMRHSFI IDPQGILRET FVKVNPSVHS TEVLARLEKL
QSAAS