Gene Ava_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0477 
Symbol 
ID3682443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp600457 
End bp601266 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content43% 
IMG OID637715804 
Producthypothetical protein 
Protein accessionYP_320996 
Protein GI75906700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.104561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCTC GTTTTTGGCG ACGAATTTTA GTATCTATTA CAGTATTTTT CTTGGCTGGG 
TCACTTTGGG TAATAAATTC TCCCTCTGCG CTGGCTTACG ACAATCCTGA GTTATTACCT
AAGTTTTTCA CACCAGTTGT AGACCTAGCT AAATCACTCC CAGATCCGCA GGAAGAAAAG
CTAGTCGAAG ACATAGAGCA ATTTGAGGCT GATACTGGTT GGAAACTACG CGTACTGACT
CAGTATGACC GCACTCCGGG TAGGGCTGTC ATTAATTATT GGGGTTTGGA TGATAAAAGC
ATTCTCCTAG TTGCTGACTC CCGTGGCGGG AACATCCTCA GTTTTAGCGT TGGTGATGCA
GTTTATGAAC TGTTACCCCG GACTTTTTGG ATAGAACTAC AAACCCGCTT TGGGAATTTG
TATTTTGTCC GAGAACAAGG TGAAGACCAA GCTATTTTAC AAGCTTTAGA TTCAGTTAAA
GGCTGTTTGC TTAAAGGTGG TTGTAACGTT GTACCTGGTC TACCCAGGGA ACAATGGATT
TTAACCTTAA TTACTTCCGT TATTGGTGGA GTTATTTGTG GCTTTGCTGG ACAACCACGC
AAGGAAGGAC AAATTTTTGC TTGGCAATGG GCTTTAATTT TCTCACCATT ATGGGGAATT
TTGTTTATAG CCTTTGGTAT TGGGCCTGTG GTCACCCGCA CAAGTGACTG GCTACCTCTA
GTCCGCAACT TCTCTGGTTT CTTCATTGGG GGTTTAGTGG CTTATTTATC CCCTGTGTTT
AGTCGTCCTT CGTCTAATGC TAATTCGTAG
 
Protein sequence
MQSRFWRRIL VSITVFFLAG SLWVINSPSA LAYDNPELLP KFFTPVVDLA KSLPDPQEEK 
LVEDIEQFEA DTGWKLRVLT QYDRTPGRAV INYWGLDDKS ILLVADSRGG NILSFSVGDA
VYELLPRTFW IELQTRFGNL YFVREQGEDQ AILQALDSVK GCLLKGGCNV VPGLPREQWI
LTLITSVIGG VICGFAGQPR KEGQIFAWQW ALIFSPLWGI LFIAFGIGPV VTRTSDWLPL
VRNFSGFFIG GLVAYLSPVF SRPSSNANS