Gene Ava_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0474 
Symbol 
ID3682440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp598012 
End bp598848 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content44% 
IMG OID637715801 
Productdihydrodipicolinate reductase 
Protein accessionYP_320993 
Protein GI75906697 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.760412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0967493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AAGCTCCTAT CCCAGTTATT GTCAATGGTG CTGCTGGCAA AATGGGACGT 
GAAGTAGTGA AAGCGATAGC CCAAGCACCA GACTTAAATT TATTGGGTGC AATTGACAGC
AGTCCAGAAC ATCAAGGTAA AGATGCTGGA GAATTAGCGG GTTTAAGTGA ACCTCTAGAA
GTTCCCATTA CAAACCAACT AGAACCAATG CTGGGTTATG TTGCAGGAGA AAGACAAGGG
CCGCCAGGGG TTATAGTAGA CTTTACCCAT CCTGACTCAG TTTATGATAA TGTACGCAGT
GCGATCGCCT ATGGCATTCG TCCCGTTGTA GGTACAACAG GATTAAGCCC AGCACAAATC
CAAAATTTAG CTGATTTTGC CGAAAAAGCC AGCACTGGCT GTCTGATTAT TCCTAACTTC
TCCATAGGTA TGGTGTTGTT ACAACAAGCA GCCGTCACCG CATCACAATA TTTTGACCAC
GTAGAAATTA TTGAACTGCA CCACAATCAA AAAGCCGACG CACCCAGTGG TACAGCCATT
CAGACAGCCG AGTTACTAGC AGAATTAGGT AAAACATTTA ACTCTGCTAT TGTGGAAGAG
ACGGAAAAAA TACCCGGAGC TAGAGGTAGT TTAGCTGGGG AAGGAATTAG AATTCATAGC
GTCCGCCTAC CGGGACTCAT AGCCCATCAA GAAGTGATTT TTGGCGCACC AGGACAAATT
TATACATTAC GCCATGATAC AAGCGATCGC GCCTGCTATA TGCCAGGAGT CTTACTTGCG
ATTCGCAAAG TCTTACAGCT AAAGTCGTTA GTATATGGTT TAGAAAAGAT CCTTTAA
 
Protein sequence
MTNQAPIPVI VNGAAGKMGR EVVKAIAQAP DLNLLGAIDS SPEHQGKDAG ELAGLSEPLE 
VPITNQLEPM LGYVAGERQG PPGVIVDFTH PDSVYDNVRS AIAYGIRPVV GTTGLSPAQI
QNLADFAEKA STGCLIIPNF SIGMVLLQQA AVTASQYFDH VEIIELHHNQ KADAPSGTAI
QTAELLAELG KTFNSAIVEE TEKIPGARGS LAGEGIRIHS VRLPGLIAHQ EVIFGAPGQI
YTLRHDTSDR ACYMPGVLLA IRKVLQLKSL VYGLEKIL